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0
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2
replies
3.3k
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How to convert gbk file to roary tool acceptable gff3 format?
linux bash python perl
updated 17 months ago by 44k • written 4.2 years ago by ▴ 120
0
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0
replies
3.3k
views
Comment: C: Error in npm installation and start.
4.3 years ago by Kumar ▴ 120
2
votes
3
replies
3.3k
views
Error in npm installation and start.
python linux bash R software error
updated 4.3 years ago by 35k • written 4.3 years ago by ▴ 120
0
votes
0
replies
890
views
Comment: C: Error in pan-genome-analysis tool panX.
4.3 years ago by Kumar ▴ 120
0
votes
2
replies
890
views
Error in pan-genome-analysis tool panX.
bash python genome perl
updated 17 months ago by 44k • written 4.3 years ago by ▴ 120
0
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0
replies
1.6k
views
Comment: C: How to remove poor quality sequences from a fasta file?
4.3 years ago by Kumar ▴ 120
0
votes
3
replies
1.6k
views
Comment: C: How to remove poor quality sequences from a fasta file?
4.3 years ago by Kumar ▴ 120
0
votes
0
replies
1.6k
views
Comment: C: How to remove poor quality sequences from a fasta file?
4.3 years ago by Kumar ▴ 120
6
votes
8
replies
1.6k
views
How to remove poor quality sequences from a fasta file?
perl python shell bash fasta
4.3 years ago by Kumar ▴ 120
1
vote
2
replies
3.8k
views
Is there any tool available to generate ultrametric tree from a rooted phylogenetic tree?
phylogeny perl python R unix
updated 4.8 years ago by ★ 3.8k • written 4.8 years ago by ▴ 120
2
votes
2
replies
1.6k
views
How to specify codon based multiple sequence alignment in clustalw command line?
clustalw fasta alignment sequence gene
updated 4.8 years ago by 15k • written 4.8 years ago by ▴ 120
0
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0
replies
3.6k
views
Comment: C: How to concatenate clustalw aligned fasta sequence?
4.8 years ago by Kumar ▴ 120
0
votes
0
replies
3.6k
views
Comment: C: How to concatenate clustalw aligned fasta sequence?
4.8 years ago by Kumar ▴ 120
0
votes
1
reply
3.6k
views
Comment: C: How to concatenate clustalw aligned fasta sequence?
updated 4.8 years ago by 8.7k • written 4.8 years ago by ▴ 120
0
votes
1
reply
3.6k
views
Comment: C: How to concatenate clustalw aligned fasta sequence?
4.8 years ago by Kumar ▴ 120
0
votes
1
reply
3.6k
views
Comment: C: How to concatenate clustalw aligned fasta sequence?
updated 4.8 years ago by 147k • written 4.8 years ago by ▴ 120
7
votes
13
replies
3.6k
views
How to concatenate clustalw aligned fasta sequence?
alignment fasta sequence clustalw
updated 4.8 years ago by 8.7k • written 4.8 years ago by ▴ 120
4
votes
4
replies
2.0k
views
How to parse sequences from a gbk file, based on the coordinates specified in given file?
perl python bash gbk
updated 4.8 years ago by ★ 3.8k • written 4.8 years ago by ▴ 120
0
votes
0
replies
2.0k
views
Comment: C: How to parse sequences from a gbk file, based on the coordinates specified in gi
4.8 years ago by Kumar ▴ 120
3
votes
1
reply
1.4k
views
Is it possible to specify CPU/thread in raxmlHPC?
phylogenetics raxml gene genetics evolution
updated 4.9 years ago by 147k • written 4.9 years ago by ▴ 120
0
votes
0
replies
1.8k
views
Comment: C: What is the meaning of final ML optimization likelihood value in raxml phylogene
4.9 years ago by Kumar ▴ 120
3
votes
2
replies
1.8k
views
What is the meaning of final ML optimization likelihood value in raxml phylogenetic analysis?
phylogeny raxml evolution diversity analysis
updated 4.9 years ago by ★ 28k • written 4.9 years ago by ▴ 120
0
votes
0
replies
908
views
Comment: C: Error in PGAP pangenome pipeline?
5.0 years ago by Kumar ▴ 120
0
votes
0
replies
908
views
Comment: C: Error in PGAP pangenome pipeline?
5.0 years ago by Kumar ▴ 120
0
votes
4
replies
908
views
Error in PGAP pangenome pipeline?
sequence genome sequencing gene
updated 18 months ago by 44k • written 5.0 years ago by ▴ 120
0
votes
0
replies
1.0k
views
Comment: C: How to identify the corresponding gene of a short sequence of a genome?
5.0 years ago by Kumar ▴ 120
0
votes
0
replies
1.0k
views
Comment: C: How to identify the corresponding gene of a short sequence of a genome?
5.0 years ago by Kumar ▴ 120
0
votes
1
reply
1.0k
views
Comment: C: How to identify the corresponding gene of a short sequence of a genome?
5.0 years ago by Kumar ▴ 120
2
votes
6
replies
1.0k
views
How to identify the corresponding gene of a short sequence of a genome?
fasta gene genome sequence
updated 18 months ago by 44k • written 5.0 years ago by ▴ 120
2
votes
1
reply
1.2k
views
Blastn is not working for short sequences?
software-error fasta blast sequence
updated 18 months ago by 44k • written 5.0 years ago by ▴ 120
0
votes
1
reply
27k
views
Comment: C: devtools Installation error in R (version 3.5.3)?
updated 5.0 years ago by 147k • written 5.7 years ago by ▴ 120
14
votes
14
replies
2.3k
views
Extract sequences consecutively from a large fasta files and save in new fasta files
python perl shell r fasta
updated 5.0 years ago by ★ 2.0k • written 5.1 years ago by ▴ 120
0
votes
1
reply
1.9k
views
Comment: C: Is there any tool available for sequence alignment concatenation and supermatrix
5.0 years ago by Kumar ▴ 120
1
vote
3
replies
1.9k
views
Is there any tool available for sequence alignment concatenation and supermatrix file generation other than Fastconcat-G?
Assembly alignment software-error
updated 18 months ago by 44k • written 5.0 years ago by ▴ 120
0
votes
0
replies
2.3k
views
Comment: C: Extract sequences consecutively from a large fasta files and save in new fasta f
5.0 years ago by Kumar ▴ 120
1
vote
0
replies
2.3k
views
Comment: C: Extract sequences consecutively from a large fasta files and save in new fasta f
5.0 years ago by Kumar ▴ 120
0
votes
1
reply
2.3k
views
Comment: C: Extract sequences consecutively from a large fasta files and save in new fasta f
5.1 years ago by Kumar ▴ 120
0
votes
0
replies
2.3k
views
Comment: C: Extract sequences consecutively from a large fasta files and save in new fasta f
5.1 years ago by Kumar ▴ 120
1
vote
1
reply
2.3k
views
Comment: C: Extract sequences consecutively from a large fasta files and save in new fasta f
5.1 years ago by Kumar ▴ 120
0
votes
1
reply
2.3k
views
Comment: C: Need help in programming?
5.1 years ago by Kumar ▴ 120
0
votes
0
replies
694
views
Comment: C: How to mine plant-inducible promoter (PIP) box from Xanthomonas genus genome?
5.1 years ago by Kumar ▴ 120
1
vote
2
replies
694
views
How to mine plant-inducible promoter (PIP) box from Xanthomonas genus genome?
assembly gene genome next-gen
updated 18 months ago by 44k • written 5.1 years ago by ▴ 120
0
votes
1
reply
921
views
Comment: C: How to get the extended unaligned bases at the end of the read in reference base
5.2 years ago by Kumar ▴ 120
2
votes
4
replies
921
views
How to get the extended unaligned bases at the end of the read in reference based genome assembly?
Assembly next-gen alignment genome sequencing
5.2 years ago by Kumar ▴ 120
0
votes
0
replies
921
views
Comment: C: How to get the extended flanking read sequences in the reference based genome as
5.2 years ago by Kumar ▴ 120
0
votes
1
reply
2.3k
views
Comment: C: How to extract promoter sequences from a plant draft genome?
5.2 years ago by Kumar ▴ 120
0
votes
0
replies
2.3k
views
Comment: C: How to extract promoter sequences from a plant draft genome?
5.2 years ago by Kumar ▴ 120
4
votes
8
replies
2.3k
views
How to extract promoter sequences from a plant draft genome?
promoter genome
updated 18 months ago by 44k • written 5.2 years ago by ▴ 120
2
votes
3
replies
1.4k
views
issue with fastQ reads download from NCBI-SRA database?
SRA fastq ngs sequencing NCBI
updated 5.2 years ago by ▴ 130 • written 5.2 years ago by ▴ 120
0
votes
1
reply
1.5k
views
samtools mpileup: bam file to consensus sequence generation error?
Assembly genome ngs samtools bcftools
5.2 years ago by Kumar ▴ 120
175 results • Page 2 of 4
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