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4
votes
3
replies
2.0k
views
Differential analysis heatmap without hclust
RNA-Seq
heatmap
complexheatmap
r
hclust
updated 4.6 years ago by
dtm2451
▴ 30 • written 5.6 years ago by
newbie
▴ 130
0
votes
1
reply
16k
views
Comment:
C: How to create a GSEA enrichment plot for the phenotypes in R?
4.6 years ago by
newbie
▴ 130
0
votes
1
reply
16k
views
Comment:
C: How to create a GSEA enrichment plot for the phenotypes in R?
4.6 years ago by
newbie
▴ 130
3
votes
9
replies
16k
views
How to create a GSEA enrichment plot for the phenotypes in R?
RNA-Seq
r
gsea
lncrna
updated 4.6 years ago by
Barry Digby
★ 1.3k • written 4.6 years ago by
newbie
▴ 130
0
votes
0
replies
16k
views
Comment:
C: How to create a GSEA enrichment plot for the phenotypes in R?
4.6 years ago by
newbie
▴ 130
0
votes
0
replies
16k
views
Comment:
C: How to create a GSEA enrichment plot for the phenotypes in R?
4.6 years ago by
newbie
▴ 130
0
votes
0
replies
1.6k
views
Comment:
C: How to check the pattern in a specific file present in which other files in a di
4.6 years ago by
newbie
▴ 130
0
votes
1
reply
1.6k
views
Comment:
C: How to check the pattern in a specific file present in which other files in a di
4.6 years ago by
newbie
▴ 130
0
votes
0
replies
1.6k
views
Comment:
C: How to check the pattern in a specific file present in which other files in a di
4.6 years ago by
newbie
▴ 130
0
votes
1
reply
1.6k
views
Comment:
C: How to check the pattern in a specific file present in which other files in a di
4.6 years ago by
newbie
▴ 130
4
votes
10
replies
1.6k
views
How to check the pattern in a specific file present in which other files in a directory?
linux
grep
find
xargs
updated 4.6 years ago by
Pierre Lindenbaum
164k • written 4.6 years ago by
newbie
▴ 130
0
votes
0
replies
1.6k
views
Comment:
C: How to check the pattern in a specific file present in which other files in a di
4.6 years ago by
newbie
▴ 130
0
votes
1
reply
2.9k
views
Comment:
C: How to create a network of multiple clusters in co-expression network?
4.7 years ago by
newbie
▴ 130
1
vote
3
replies
2.9k
views
How to create a network of multiple clusters in co-expression network?
RNA-Seq
wgcna
network
coexpression
mrna
updated 4.7 years ago by
ashish
▴ 680 • written 4.7 years ago by
newbie
▴ 130
0
votes
0
replies
1.0k
views
bedtools usage to extract the non overlaps between two gtfs
gtf
bedtools
intersect
mitranscriptome
lncrna
4.7 years ago by
newbie
▴ 130
0
votes
0
replies
2.9k
views
Comment:
C: How to get the phastcons score for protein coding genes and lncRNAs?
4.8 years ago by
newbie
▴ 130
0
votes
0
replies
2.9k
views
Comment:
C: How to get the phastcons score for protein coding genes and lncRNAs?
4.8 years ago by
newbie
▴ 130
0
votes
0
replies
2.9k
views
Comment:
C: How to get the phastcons score for protein coding genes and lncRNAs?
4.8 years ago by
newbie
▴ 130
0
votes
1
reply
1.5k
views
Comment:
C: How to check the mutual exclusiveness between two genes?
4.8 years ago by
newbie
▴ 130
3
votes
3
replies
1.5k
views
How to check the mutual exclusiveness between two genes?
mutation
mutual exclusivity
statistics
updated 4.8 years ago by
russhh
5.7k • written 4.8 years ago by
newbie
▴ 130
0
votes
2
replies
14k
views
Comment:
C: How to get read counts on transcript level using featurecounts?
4.9 years ago by
newbie
▴ 130
32
votes
13
replies
14k
views
8 follow
How to get read counts on transcript level using featurecounts?
RNA-Seq
featurecounts
geneexpression
updated 4.9 years ago by
Gordon Smyth
★ 7.7k • written 4.9 years ago by
newbie
▴ 130
0
votes
1
reply
14k
views
Comment:
C: How to get read counts on transcript level using featurecounts?
4.9 years ago by
newbie
▴ 130
0
votes
0
replies
1.2k
views
Comment:
C: Question about processed microarray data from ArrayExpress
4.9 years ago by
newbie
▴ 130
0
votes
1
reply
1.2k
views
Comment:
C: Question about processed microarray data from ArrayExpress
updated 4.9 years ago by
ATpoint
86k • written 4.9 years ago by
newbie
▴ 130
3
votes
4
replies
1.2k
views
Question about processed microarray data from ArrayExpress
microarray
geneexpression
r
RNA-Seq
arrayexpress
updated 4.9 years ago by
ATpoint
86k • written 4.9 years ago by
newbie
▴ 130
0
votes
1
reply
3.2k
views
Comment:
C: feature selection using random forest
4.9 years ago by
newbie
▴ 130
0
votes
5
replies
3.2k
views
feature selection using random forest
RNA-Seq
R
randomforest
featureselection
updated 4.9 years ago by
dsull
★ 7.1k • written 4.9 years ago by
newbie
▴ 130
0
votes
0
replies
3.2k
views
Comment:
C: feature selection using random forest
4.9 years ago by
newbie
▴ 130
0
votes
0
replies
2.5k
views
Comment:
C: How to make a heatmap showing signatures of scores from 0 to 1 in R?
5.4 years ago by
newbie
▴ 130
0
votes
1
reply
2.5k
views
Comment:
C: How to make a heatmap showing signatures of scores from 0 to 1 in R?
5.4 years ago by
newbie
▴ 130
5
votes
14
replies
2.5k
views
How to make a heatmap showing signatures of scores from 0 to 1 in R?
RNA-Seq
heatmap
complexheatmap
r
signatures
5.4 years ago by
newbie
▴ 130
0
votes
0
replies
2.5k
views
Comment:
C: How to make a heatmap showing signatures of scores from 0 to 1 in R?
5.4 years ago by
newbie
▴ 130
0
votes
1
reply
2.5k
views
Comment:
C: How to make a heatmap showing signatures of scores from 0 to 1 in R?
5.4 years ago by
newbie
▴ 130
1
vote
1
reply
2.5k
views
Comment:
C: How to make a heatmap showing signatures of scores from 0 to 1 in R?
5.4 years ago by
newbie
▴ 130
0
votes
1
reply
2.5k
views
Comment:
C: How to make a heatmap showing signatures of scores from 0 to 1 in R?
5.4 years ago by
newbie
▴ 130
0
votes
1
reply
2.5k
views
Comment:
C: How to make a heatmap showing signatures of scores from 0 to 1 in R?
5.4 years ago by
newbie
▴ 130
1
vote
0
replies
2.7k
views
Comment:
C: soft threshold for co-expression analysis using WGCNA based on scale independenc
5.6 years ago by
newbie
▴ 130
0
votes
1
reply
2.7k
views
Comment:
C: soft threshold for co-expression analysis using WGCNA based on scale independenc
5.6 years ago by
newbie
▴ 130
0
votes
1
reply
2.7k
views
Comment:
C: soft threshold for co-expression analysis using WGCNA based on scale independenc
5.6 years ago by
newbie
▴ 130
0
votes
0
replies
2.7k
views
Comment:
C: soft threshold for co-expression analysis using WGCNA based on scale independenc
5.6 years ago by
newbie
▴ 130
0
votes
1
reply
2.7k
views
Comment:
C: soft threshold for co-expression analysis using WGCNA based on scale independenc
5.6 years ago by
newbie
▴ 130
4
votes
9
replies
2.7k
views
soft threshold for co-expression analysis using WGCNA based on scale independence
RNA-Seq
R
wgcna
co-expression
5.6 years ago by
newbie
▴ 130
5
votes
5
replies
3.2k
views
what to do when differential analysis heatmap looks like this?
RNA-Seq
R
heatmap
differentialanalysis
edger
updated 5.6 years ago by
eric.audemard
▴ 10 • written 5.6 years ago by
newbie
▴ 130
0
votes
1
reply
3.2k
views
Comment:
C: what to do when differential analysis heatmap looks like this?
5.6 years ago by
newbie
▴ 130
0
votes
0
replies
2.3k
views
Comment:
C: Differential analysis using cell-line data with replicate information
5.7 years ago by
newbie
▴ 130
0
votes
0
replies
2.3k
views
Comment:
C: Differential analysis using cell-line data with replicate information
5.7 years ago by
newbie
▴ 130
0
votes
1
reply
2.3k
views
Comment:
C: Differential analysis using cell-line data with replicate information
5.7 years ago by
newbie
▴ 130
0
votes
1
reply
2.3k
views
Comment:
C: Differential analysis using cell-line data with replicate information
5.7 years ago by
newbie
▴ 130
0
votes
1
reply
2.3k
views
Comment:
C: Differential analysis using cell-line data with replicate information
5.7 years ago by
newbie
▴ 130
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