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Comment: C: How to remove regions from a vcf file ?
9.2 years ago by pengchy ▴ 460
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1.9k
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Comment: C: genome resequencing across developmental stages
9.2 years ago by pengchy ▴ 460
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2
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2.4k
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import stke pathway xml file into cytoscape
xml cytoscape network pathway
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 460
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0
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18k
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Comment: C: Transcription Factor Binding Site Prediction
9.2 years ago by pengchy ▴ 460
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3
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4.9k
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software to convert pwm matrix to consensus sequence
pwm consensus sequence
updated 9.2 years ago by ★ 2.2k • written 9.3 years ago by ▴ 460
4
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1
reply
98k
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Answer: Answer: How To Get The Sequence Of A Genomic Region From Ucsc?
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 460
3
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4
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1.9k
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genome resequencing across developmental stages
dna resequencing development
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 460
12
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3
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13k
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words: time course VS time series
time-course time-series
updated 20 months ago by 44k • written 9.4 years ago by ▴ 460
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0
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4.3k
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Comment: C: Database for C. elegans TFBS
9.3 years ago by pengchy ▴ 460
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4.3k
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Comment: C: Database for C. elegans TFBS
9.3 years ago by pengchy ▴ 460
7
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5
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4.3k
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Database for C. elegans TFBS
ChIP-Seq database c.elegans TFBS
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 460
9
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1
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2.1k
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what is the meaning of "degenerative nature" of Chip-seq
chip-seq
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 460
2
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0
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10k
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Answer: A: Human Gene Regulatory Database
9.4 years ago by pengchy ▴ 460
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2.0k
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Comment: Comment: ARACNE and TimeDelay ARACNE
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 460
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2
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2.0k
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Answer: Answer: ARACNE and TimeDelay ARACNE
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 460
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0
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6.0k
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Answer: Answer: Calling differential gene expression in Time series
updated 2.9 years ago by 44k • written 9.4 years ago by ▴ 460
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0
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4.4k
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Answer: A: RNA seq time course data experiment design
9.4 years ago by pengchy ▴ 460
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0
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2.4k
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What is the meaning of "intron-redundant transfrags" in cuffcompare?
rnaseq rna-seq cufflinks
updated 9.5 years ago by 20 • written 9.8 years ago by ▴ 460
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1
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1.5k
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Comment: Comment: deploy wwwblast on tomcat?
updated 2.3 years ago by 44k • written 9.5 years ago by ▴ 460
4
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8
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1.5k
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deploy wwwblast on tomcat?
wwwblast tomcat
updated 2.3 years ago by 44k • written 9.6 years ago by ▴ 460
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0
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1.5k
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Comment: C: deploy wwwblast on tomcat?
9.6 years ago by pengchy ▴ 460
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0
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9.4k
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Comment: Comment: Should I Strip Alignment Columns Before Making A Tree?
updated 2.2 years ago by 44k • written 9.7 years ago by ▴ 460
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1
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4.0k
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Comment: Comment: What the use of MEDIAN_CV_COVERAGE from picard RNA metrics
updated 2.2 years ago by 44k • written 9.7 years ago by ▴ 460
4
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3
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4.0k
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What the use of MEDIAN_CV_COVERAGE from picard RNA metrics
RNA-Seq picard
updated 2.2 years ago by 44k • written 9.8 years ago by ▴ 460
2
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4
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4.8k
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design primer for alternative splicing events
alternative-splicing primer-design RNA-Seq
updated 2.1 years ago by 44k • written 9.8 years ago by ▴ 460
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1
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1.5k
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How to use ALL reads to calculate the RNAmetrics
RNA-Seq picard
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 460
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0
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9.9k
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Answer: A: Remove Redundant Sequences Fasta
9.7 years ago by pengchy ▴ 460
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0
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5.9k
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Comment: C: topGO use showSigOfNodes for non-topGO data? or: how to visualize GO graph from
9.7 years ago by pengchy ▴ 460
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0
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4.8k
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Comment: C: Video: Alternative Splicing and Primer Design
9.8 years ago by pengchy ▴ 460
1
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0
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2.6k
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Answer: Answer: clustering best choice
updated 2.9 years ago by 44k • written 9.8 years ago by ▴ 460
1
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1
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4.8k
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Answer: Answer: Video: Alternative Splicing and Primer Design
updated 2.1 years ago by 44k • written 9.8 years ago by ▴ 460
1
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0
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6.6k
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Answer: Answer: Program For Flagging Alternative Splicing Events From A Genome Annotation
updated 2.4 years ago by 44k • written 9.8 years ago by ▴ 460
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0
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4.7k
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Comment: C: Working With Fastq Files In Gmap
9.8 years ago by pengchy ▴ 460
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0
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6.1k
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Comment: Comment: Is it possible to convert fastq format to PacBio bax.h5 file?
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 460
7
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3
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6.1k
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Is it possible to convert fastq format to PacBio bax.h5 file?
fastq PacBio
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 460
4
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0
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17k
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Answer: Answer: What Do You Waste Your Time On
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 460
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0
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17k
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Comment: C: What Do You Waste Your Time On
9.8 years ago by pengchy ▴ 460
2
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0
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17k
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Comment: Comment: What Do You Waste Your Time On
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 460
0
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1
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17k
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Answer: Answer: What tools you use or know for PacBio Long Read error correction?
updated 3.9 years ago by 44k • written 9.8 years ago by ▴ 460
0
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0
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11k
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Comment: C: Tophat Junctions.Bed File
9.8 years ago by pengchy ▴ 460
2
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0
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3.1k
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cuffcompare class code "u" not real unknown intergenic
cufflinks RNA-Seq cuffcompare
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 460
0
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0
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3.2k
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Comment: C: Inconsistency Between Cufflinks And Cuffcompare
9.8 years ago by pengchy ▴ 460
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0
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2.7k
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Comment: C: Cuffcompare Output '-' Versus Fpkm = 0
9.8 years ago by pengchy ▴ 460
0
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0
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4.4k
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Answer: A: Cuffcompare: Some Cufflinks Transcripts Are Not Contained By Cuffcompare Output
9.8 years ago by pengchy ▴ 460
0
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0
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1.4k
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scripts to filter cuffcompare results
RNA-Seq gtf cufflinks
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 460
1
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0
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3.4k
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Answer: Answer: first and second mate reports by samtools 0x40 and 0x60 FLAGs
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 460
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0
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7.0k
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Comment: C: why is FPKM equal to 0 in transcripts.gtf generating by cufflinks?
9.8 years ago by pengchy ▴ 460
0
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0
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4.3k
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Comment: C: How Can Cufflinks Assemble De Novo Transcripts With Many Exons When They Have 0
9.8 years ago by pengchy ▴ 460
0
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1
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7.0k
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Answer: A: why is FPKM equal to 0 in transcripts.gtf generating by cufflinks?
9.8 years ago by pengchy ▴ 460
0
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0
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8.1k
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Answer: Answer: Error For End Coordinate When Running Cuffdiff
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 460
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