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Answer: Answer: NGS data analysis
2.4 years ago by noodle ▴ 650
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1.3k
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Answer: Answer: Classifying shotgun metagenomes with 16S rRNA database.
2.4 years ago by noodle ▴ 650
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1
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1.8k
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Comment: Comment: How to check for Over or Under-marking Duplicates in BAM files
2.4 years ago by noodle ▴ 650
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1
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1.9k
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Answer: Answer: Some questions on RAD paired-end sequencing
2.4 years ago by noodle ▴ 650
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1.6k
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Comment: Comment: information about genes from different databases and patents
2.4 years ago by noodle ▴ 650
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1
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1.6k
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Comment: Comment: information about genes from different databases and patents
2.4 years ago by noodle ▴ 650
1
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2
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1.6k
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Answer: Answer: information about genes from different databases and patents
2.4 years ago by noodle ▴ 650
0
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0
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485
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Table summary for SNP linkages from same read
NGS SNP RNAseq
2.4 years ago by noodle ▴ 650
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1
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2.3k
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Answer: Answer: Is removing rRNAs, tRNAs, etc really a necessary step in the miRNA analysis?
2.4 years ago by noodle ▴ 650
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5.2k
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Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
2.4 years ago by noodle ▴ 650
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0
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5.2k
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Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
2.4 years ago by noodle ▴ 650
1
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1
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5.2k
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Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
2.4 years ago by noodle ▴ 650
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1
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1.0k
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Comment: Comment: create 'negative' bed annotation from bed
2.5 years ago by noodle ▴ 650
4
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3
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1.0k
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create 'negative' bed annotation from bed
bed gtf gff
updated 2.5 years ago by 45k • written 2.5 years ago by ▴ 650
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0
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1.9k
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Comment: Comment: Compare two RNA-Seq log2fc tables
2.6 years ago by noodle ▴ 650
2
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1
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1.9k
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Answer: Answer: Compare two RNA-Seq log2fc tables
2.6 years ago by noodle ▴ 650
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0
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3.7k
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Comment: Comment: Laptop specs for MiniON
2.6 years ago by noodle ▴ 650
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1
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3.7k
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Comment: Comment: Laptop specs for MiniON
2.6 years ago by noodle ▴ 650
3
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1
reply
738
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LSF bsub SSUSP job stdout
IBM LSF bsub
2.7 years ago by noodle ▴ 650
1
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0
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738
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Answer: Answer: LSF bsub SSUSP job stdout
2.7 years ago by noodle ▴ 650
0
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1
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1.4k
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Comment: Comment: Explanation of BAM compression levels
2.7 years ago by noodle ▴ 650
5
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3
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1.4k
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Explanation of BAM compression levels
compression BAM
updated 2.7 years ago by 5.0k • written 2.7 years ago by ▴ 650
2
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3
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1.2k
views
picard CollectRnaSeqMetrics gene coverage
picard gatk CollectRnaSeqMetrics
2.7 years ago by noodle ▴ 650
2
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0
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1.2k
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Answer: Answer: picard CollectRnaSeqMetrics gene coverage
2.7 years ago by noodle ▴ 650
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0
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1.2k
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Comment: Comment: picard CollectRnaSeqMetrics gene coverage
2.7 years ago by noodle ▴ 650
0
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0
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518
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RSamtools get picard tags
RSamtools samtools R RStudio
updated 24 months ago by 45k • written 2.8 years ago by ▴ 650
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0
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550
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16S (18S) rRNA primer design
taxonomy primer design mopo16s
3.1 years ago by noodle ▴ 650
0
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0
replies
595
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RSEM gff 'parent' field
RNAseq transcriptomics RSEM
3.6 years ago by noodle ▴ 650
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0
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3.3k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.6 years ago by noodle ▴ 650
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1
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3.3k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.6 years ago by noodle ▴ 650
0
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2
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3.3k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.7 years ago by noodle ▴ 650
0
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1
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3.3k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.7 years ago by noodle ▴ 650
0
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0
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3.3k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.7 years ago by noodle ▴ 650
2
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11
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3.3k
views
Convert transcriptomic bam to genomic bam
genome bisulfite bam transcriptome
3.6 years ago by noodle ▴ 650
0
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0
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1.5k
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Comment: Comment: AlphaFold on AWS metrics
3.7 years ago by noodle ▴ 650
0
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2
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1.5k
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AlphaFold on AWS metrics
AlphaFold AWS
3.7 years ago by noodle ▴ 650
0
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0
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682
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STAR bisulfite mapping
STAR bisulfite RNAseq
3.7 years ago by noodle ▴ 650
0
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0
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703
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Additional nanopore barcodes for RNA long reads
RNAseq NGS nanopore
3.7 years ago by noodle ▴ 650
4
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3
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1.6k
views
UCSC MySQL access
UCSC MySQL
updated 3.8 years ago by ▴ 670 • written 4.5 years ago by ▴ 650
0
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0
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7.6k
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Answer: Answer: Extracting exons and transcripts from gff3/gtf
3.8 years ago by noodle ▴ 650
0
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0
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3.8k
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Answer: Answer: Segmentation fault (core dumped) error when running MUSCLE
3.8 years ago by noodle ▴ 650
1
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0
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2.1k
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Answer: Answer: RNAseq data mapping mostly to intergenic regions
3.8 years ago by noodle ▴ 650
0
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0
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1.5k
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Comment: Comment: convert genomic bigWig file to transcriptome space
3.8 years ago by noodle ▴ 650
0
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1
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1.5k
views
Comment: Comment: convert genomic bigWig file to transcriptome space
3.8 years ago by noodle ▴ 650
2
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4
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1.5k
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convert genomic bigWig file to transcriptome space
bigWig bw
3.8 years ago by noodle ▴ 650
0
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0
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583
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Lifemap (phylogeny plot) custom display
taxonmy phylogeny lifemap
3.8 years ago by noodle ▴ 650
0
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0
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1.6k
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Comment: Comment: Pipeline version control system, pipeline storage
3.8 years ago by noodle ▴ 650
0
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0
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10k
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Comment: Comment: T2T-CHM13 "complete" human genome gff/gtf annotation file
3.8 years ago by noodle ▴ 650
0
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0
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611
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IGV add contig/chr to genome file within session
genome IGV bam alignment
4.0 years ago by noodle ▴ 650
0
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0
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2.3k
views
Answer: Answer: igvtools not running, issue with java
4.0 years ago by noodle ▴ 650
207 results • Page 3 of 5
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