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Comment:
Comment: Compare two RNA-Seq log2fc tables
24 months ago by
noodle
▴ 590
2
votes
1
reply
1.5k
views
Answer:
Answer: Compare two RNA-Seq log2fc tables
24 months ago by
noodle
▴ 590
0
votes
0
replies
2.9k
views
Comment:
Comment: Laptop specs for MiniON
2.1 years ago by
noodle
▴ 590
0
votes
1
reply
2.9k
views
Comment:
Comment: Laptop specs for MiniON
2.1 years ago by
noodle
▴ 590
3
votes
1
reply
623
views
LSF bsub SSUSP job stdout
IBM
LSF
bsub
2.1 years ago by
noodle
▴ 590
1
vote
0
replies
623
views
Answer:
Answer: LSF bsub SSUSP job stdout
2.1 years ago by
noodle
▴ 590
0
votes
1
reply
1.1k
views
Comment:
Comment: Explanation of BAM compression levels
2.1 years ago by
noodle
▴ 590
5
votes
3
replies
1.1k
views
Explanation of BAM compression levels
compression
BAM
updated 2.1 years ago by
LChart
4.5k • written 2.1 years ago by
noodle
▴ 590
2
votes
3
replies
1.0k
views
picard CollectRnaSeqMetrics gene coverage
picard
gatk
CollectRnaSeqMetrics
2.1 years ago by
noodle
▴ 590
2
votes
0
replies
1.0k
views
Answer:
Answer: picard CollectRnaSeqMetrics gene coverage
2.1 years ago by
noodle
▴ 590
0
votes
0
replies
1.0k
views
Comment:
Comment: picard CollectRnaSeqMetrics gene coverage
2.1 years ago by
noodle
▴ 590
0
votes
0
replies
437
views
RSamtools get picard tags
RSamtools
samtools
R
RStudio
updated 17 months ago by
Ram
44k • written 2.2 years ago by
noodle
▴ 590
0
votes
0
replies
446
views
16S (18S) rRNA primer design
taxonomy
primer
design
mopo16s
2.5 years ago by
noodle
▴ 590
0
votes
0
replies
517
views
RSEM gff 'parent' field
RNAseq
transcriptomics
RSEM
3.0 years ago by
noodle
▴ 590
0
votes
0
replies
2.8k
views
Comment:
Comment: Convert transcriptomic bam to genomic bam
3.1 years ago by
noodle
▴ 590
0
votes
1
reply
2.8k
views
Comment:
Comment: Convert transcriptomic bam to genomic bam
3.1 years ago by
noodle
▴ 590
0
votes
2
replies
2.8k
views
Comment:
Comment: Convert transcriptomic bam to genomic bam
3.1 years ago by
noodle
▴ 590
0
votes
1
reply
2.8k
views
Comment:
Comment: Convert transcriptomic bam to genomic bam
3.1 years ago by
noodle
▴ 590
0
votes
0
replies
2.8k
views
Comment:
Comment: Convert transcriptomic bam to genomic bam
3.1 years ago by
noodle
▴ 590
2
votes
11
replies
2.8k
views
Convert transcriptomic bam to genomic bam
genome
bisulfite
bam
transcriptome
3.1 years ago by
noodle
▴ 590
0
votes
0
replies
1.4k
views
Comment:
Comment: AlphaFold on AWS metrics
3.1 years ago by
noodle
▴ 590
0
votes
2
replies
1.4k
views
AlphaFold on AWS metrics
AlphaFold
AWS
3.1 years ago by
noodle
▴ 590
0
votes
0
replies
564
views
STAR bisulfite mapping
STAR
bisulfite
RNAseq
3.1 years ago by
noodle
▴ 590
0
votes
0
replies
626
views
Additional nanopore barcodes for RNA long reads
RNAseq
NGS
nanopore
3.1 years ago by
noodle
▴ 590
4
votes
3
replies
1.3k
views
UCSC MySQL access
UCSC
MySQL
updated 3.2 years ago by
Luis Nassar
▴ 670 • written 3.9 years ago by
noodle
▴ 590
0
votes
0
replies
6.7k
views
Answer:
Answer: Extracting exons and transcripts from gff3/gtf
3.2 years ago by
noodle
▴ 590
0
votes
0
replies
3.3k
views
Answer:
Answer: Segmentation fault (core dumped) error when running MUSCLE
3.2 years ago by
noodle
▴ 590
1
vote
0
replies
1.8k
views
Answer:
Answer: RNAseq data mapping mostly to intergenic regions
3.2 years ago by
noodle
▴ 590
0
votes
0
replies
1.2k
views
Comment:
Comment: convert genomic bigWig file to transcriptome space
3.2 years ago by
noodle
▴ 590
0
votes
1
reply
1.2k
views
Comment:
Comment: convert genomic bigWig file to transcriptome space
3.2 years ago by
noodle
▴ 590
2
votes
4
replies
1.2k
views
convert genomic bigWig file to transcriptome space
bigWig
bw
3.2 years ago by
noodle
▴ 590
0
votes
0
replies
498
views
Lifemap (phylogeny plot) custom display
taxonmy
phylogeny
lifemap
3.2 years ago by
noodle
▴ 590
0
votes
0
replies
1.3k
views
Comment:
Comment: Pipeline version control system, pipeline storage
3.2 years ago by
noodle
▴ 590
0
votes
0
replies
8.4k
views
Comment:
Comment: T2T-CHM13 "complete" human genome gff/gtf annotation file
3.3 years ago by
noodle
▴ 590
0
votes
0
replies
551
views
IGV add contig/chr to genome file within session
genome
IGV
bam
alignment
3.4 years ago by
noodle
▴ 590
0
votes
0
replies
1.9k
views
Answer:
Answer: igvtools not running, issue with java
3.4 years ago by
noodle
▴ 590
1
vote
0
replies
2.1k
views
Answer:
Answer: 16S rRNA merge forward and reverse primers
3.4 years ago by
noodle
▴ 590
0
votes
0
replies
613
views
adding annotations to ggmsa() in R
R
ggplot
cran
msa
ggmsa
3.4 years ago by
noodle
▴ 590
0
votes
2
replies
8.4k
views
Comment:
Comment: T2T-CHM13 "complete" human genome gff/gtf annotation file
3.5 years ago by
noodle
▴ 590
0
votes
0
replies
821
views
Comment:
C: system commands from R containing single and double quotes
3.8 years ago by
noodle
▴ 590
0
votes
2
replies
821
views
system commands from R containing single and double quotes
R
bash
3.8 years ago by
noodle
▴ 590
1
vote
0
replies
739
views
Answer:
A: PDB glossary for three letter codes
3.7 years ago by
noodle
▴ 590
1
vote
1
reply
739
views
PDB glossary for three letter codes
PDB
cif
R
bio3d
Rpdb
3.7 years ago by
noodle
▴ 590
0
votes
1
reply
2.6k
views
Comment:
C: Human snoRNA atlas from small RNA sequencing data in deepBase
3.8 years ago by
noodle
▴ 590
0
votes
1
reply
2.6k
views
Comment:
C: Human snoRNA atlas from small RNA sequencing data in deepBase
3.8 years ago by
noodle
▴ 590
13
votes
15
replies
7.0k
views
NCBI SRA AWS AMI
SRA
NCBI
AWS
S3
3.9 years ago by
noodle
▴ 590
0
votes
1
reply
7.0k
views
Comment:
C: NCBI SRA AWS AMI
3.9 years ago by
noodle
▴ 590
1
vote
0
replies
1.5k
views
Comment:
C: genes not mapping to ENTREZID
3.9 years ago by
noodle
▴ 590
1
vote
1
reply
1.5k
views
Comment:
C: genes not mapping to ENTREZID
3.9 years ago by
noodle
▴ 590
0
votes
0
replies
1.3k
views
Comment:
C: UCSC MySQL access
3.9 years ago by
noodle
▴ 590
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