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1
vote
1
reply
5.1k
views
Answer:
A: sam/bam file handling -> new tools?
9.8 years ago by
Ying W
★ 4.3k
1
vote
1
reply
4.0k
views
Answer:
A: Illumina BeadChip Replicate Probes
9.8 years ago by
Ying W
★ 4.3k
0
votes
0
replies
1.8k
views
Comment:
C: Unpacking reference file for Isaac Aligner
9.8 years ago by
Ying W
★ 4.3k
0
votes
1
reply
4.5k
views
Comment:
Comment: problems in Diffbind In Creating Diffbind Object In R For Chip-Seq Peaks
updated 2.7 years ago by
Ram
44k • written 9.8 years ago by
Ying W
★ 4.3k
0
votes
0
replies
1.4k
views
Comment:
C: Stand alone Google Scholar profile
9.8 years ago by
Ying W
★ 4.3k
2
votes
2
replies
7.8k
views
Answer:
A: Convert GVF to VCF
9.9 years ago by
Ying W
★ 4.3k
2
votes
1
reply
7.8k
views
Comment:
Comment: Best Practices For Using Fimo For Motif Scanning
updated 2.7 years ago by
Ram
44k • written 9.9 years ago by
Ying W
★ 4.3k
0
votes
0
replies
3.1k
views
Answer:
A: representation of chipseq and RNA-seq data
10.0 years ago by
Ying W
★ 4.3k
1
vote
0
replies
11k
views
Comment:
C: p-value or adjusted p-value?
10.0 years ago by
Ying W
★ 4.3k
0
votes
0
replies
11k
views
Comment:
C: What statistical test does DESeq use?
10.0 years ago by
Ying W
★ 4.3k
0
votes
0
replies
5.5k
views
Comment:
Comment: Fast generation of random scale-free networks with a defined power law using R
updated 2.9 years ago by
Ram
44k • written 10.0 years ago by
Ying W
★ 4.3k
10
votes
2
replies
11k
views
Answer:
Answer: What statistical test does DESeq use?
updated 2.8 years ago by
Ram
44k • written 10.0 years ago by
Ying W
★ 4.3k
0
votes
0
replies
1.7k
views
Comment:
C: What tool should I use to compare biological reps
10.0 years ago by
Ying W
★ 4.3k
0
votes
0
replies
2.7k
views
Comment:
C: Merging multiplexed bam files
10.0 years ago by
Ying W
★ 4.3k
5
votes
1
reply
9.2k
views
Answer:
A: Difference between various GRCH 37 releases?
10.0 years ago by
Ying W
★ 4.3k
0
votes
1
reply
4.7k
views
Comment:
C: tag density v.s. binding affinity v.s. signal value
10.0 years ago by
Ying W
★ 4.3k
1
vote
1
reply
4.7k
views
Answer:
Answer: tag density v.s. binding affinity v.s. signal value
updated 2.8 years ago by
Ram
44k • written 10.0 years ago by
Ying W
★ 4.3k
0
votes
0
replies
3.6k
views
Answer:
A: TCGA data looks different on ICGC
10.0 years ago by
Ying W
★ 4.3k
1
vote
0
replies
5.2k
views
Comment:
C: Transcription Factor Binding Sites
10.0 years ago by
Ying W
★ 4.3k
0
votes
1
reply
2.7k
views
Comment:
C: Merging multiplexed bam files
10.0 years ago by
Ying W
★ 4.3k
5
votes
0
replies
11k
views
Answer:
Answer: Comparing two ChIP-seq libraries
updated 2.8 years ago by
Ram
44k • written 10.1 years ago by
Ying W
★ 4.3k
1
vote
0
replies
3.9k
views
Comment:
C: 12.2% of protein coding transcripts in GRCh38.cds.all.fa (from Ensembl db) don't
10.1 years ago by
Ying W
★ 4.3k
0
votes
0
replies
2.4k
views
Answer:
A: calling 1000G SNPs/indels from ngs data (chipseq or other source)
10.1 years ago by
Ying W
★ 4.3k
1
vote
0
replies
3.1k
views
Answer:
A: Which journal do you frequently read/recommend for reviews/updates in computatio
10.1 years ago by
Ying W
★ 4.3k
2
votes
1
reply
26k
views
Comment:
C: Genomics is not Special. Computational Biologist are reinventing the wheel for b
10.1 years ago by
Ying W
★ 4.3k
0
votes
1
reply
7.9k
views
Answer:
A: What is trace in R's heatmap.2 function?
10.1 years ago by
Ying W
★ 4.3k
1
vote
0
replies
2.8k
views
Answer:
A: Chip-seq common control for two treatments
10.1 years ago by
Ying W
★ 4.3k
0
votes
0
replies
3.2k
views
Comment:
C: Next maSigPro time course packages input problems ??
10.1 years ago by
Ying W
★ 4.3k
2
votes
0
replies
14k
views
Comment:
C: Tutorial (How to analyze) on Whole Exome sequencing. Common Errors. Best Practic
10.1 years ago by
Ying W
★ 4.3k
2
votes
0
replies
2.1k
views
Comment:
Comment: How to download a large amount of NGS metadata for studies?
updated 2.9 years ago by
Ram
44k • written 10.1 years ago by
Ying W
★ 4.3k
1
vote
0
replies
5.3k
views
Comment:
Comment: How to download a specific sample from TCGA ?
updated 3.7 years ago by
Ram
44k • written 10.2 years ago by
Ying W
★ 4.3k
2
votes
0
replies
2.8k
views
Comment:
Comment: How to visualize reads at per base position for a SNP
updated 3.0 years ago by
Ram
44k • written 10.3 years ago by
Ying W
★ 4.3k
1
vote
1
reply
9.5k
views
Comment:
C: Seqlogo and Homer
10.3 years ago by
Ying W
★ 4.3k
1
vote
0
replies
15k
views
Comment:
Comment: ChIP-Seq: Calling peaks with replicates
updated 3.0 years ago by
Ram
44k • written 10.3 years ago by
Ying W
★ 4.3k
0
votes
1
reply
2.2k
views
Comment:
C: Installation of SubcloneSeeker
10.3 years ago by
Ying W
★ 4.3k
5
votes
1
reply
9.5k
views
Answer:
A: Seqlogo and Homer
10.3 years ago by
Ying W
★ 4.3k
3
votes
0
replies
6.0k
views
Answer:
A: How can I programmatically download the GEO DataSets of a given accession?
10.3 years ago by
Ying W
★ 4.3k
2
votes
0
replies
4.9k
views
Answer:
A: chipseq data normalization
10.5 years ago by
Ying W
★ 4.3k
0
votes
0
replies
10k
views
Comment:
C: gffread is not working
10.6 years ago by
Ying W
★ 4.3k
1
vote
1
reply
5.4k
views
Answer:
A: Which kind of microRNAs expression are measured in TCGA?
10.6 years ago by
Ying W
★ 4.3k
0
votes
0
replies
3.8k
views
Comment:
C: Illumina Microarray Annotation
10.6 years ago by
Ying W
★ 4.3k
1
vote
1
reply
3.8k
views
Answer:
A: Illumina Microarray Annotation
10.7 years ago by
Ying W
★ 4.3k
1
vote
1
reply
3.4k
views
Comment:
C: What Happened To The Automotif Server?
10.7 years ago by
Ying W
★ 4.3k
2
votes
2
replies
8.4k
views
Answer:
A: WGCNA with time series data
10.7 years ago by
Ying W
★ 4.3k
1
vote
0
replies
1.7k
views
Comment:
C: Does Anyone Know Where To Find Treearrange?
10.8 years ago by
Ying W
★ 4.3k
1
vote
1
reply
4.1k
views
Answer:
A: Constructing Compute Resources In Support Of Ngs In A Hospital Setting
10.8 years ago by
Ying W
★ 4.3k
0
votes
0
replies
2.0k
views
Comment:
C: Is There A High Quality Genome Build For Saccharomyces Cerevisiae Sk1
10.9 years ago by
Ying W
★ 4.3k
0
votes
0
replies
2.6k
views
Answer:
A: Mat Algorithm Score For Chip Chip Data
10.9 years ago by
Ying W
★ 4.3k
1
vote
0
replies
4.6k
views
Answer:
A: Meaning Of Negative Values In Wig File?
10.9 years ago by
Ying W
★ 4.3k
0
votes
0
replies
87k
views
Comment:
Comment: Piping With Samtools, Bwa And Bedtools
updated 2.7 years ago by
Ram
44k • written 10.9 years ago by
Ying W
★ 4.3k
321 results • Page
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