Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
4.7k
views
Comment: C: Reference Guided De Novo assembly of Contigs generated from Illumina PE Reads
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
2.1k
views
Comment: C: Do you NEED to bin a metagenome into MAGs?
4.0 years ago by robert.murphy ▴ 90
0
votes
5
replies
2.1k
views
Do you NEED to bin a metagenome into MAGs?
Assembly binning
updated 4.0 years ago by 3.2k • written 4.0 years ago by ▴ 90
0
votes
0
replies
4.8k
views
Comment: C: Prokka Annotation or NCBI Annotation
4.0 years ago by robert.murphy ▴ 90
0
votes
0
replies
644
views
co-assembly bam file generation for metagenomic binning
Assembly binning
4.0 years ago by robert.murphy ▴ 90
0
votes
0
replies
1.6k
views
Comment: C: Blastn on illumina reads for contamination detection before or after quality fil
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
1.6k
views
Comment: C: Blastn on illumina reads for contamination detection before or after quality fil
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
1.6k
views
Comment: C: Blastn on illumina reads for contamination detection before or after quality fil
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
1.6k
views
Comment: C: Blastn on illumina reads for contamination detection before or after quality fil
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
945
views
Comment: C: To merge or not to merge during de novo assembly?
updated 4.0 years ago by 15k • written 4.0 years ago by ▴ 90
0
votes
1
reply
945
views
Comment: C: To merge or not to merge during de novo assembly?
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
945
views
Comment: C: To merge or not to merge during de novo assembly?
4.0 years ago by robert.murphy ▴ 90
2
votes
7
replies
945
views
To merge or not to merge during de novo assembly?
Assembly
4.0 years ago by robert.murphy ▴ 90
0
votes
0
replies
5.7k
views
Comment: C: BWA mem skip orientation RF/RR as there are not enough pairs
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
5.7k
views
Comment: C: BWA mem skip orientation RF/RR as there are not enough pairs
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
5.7k
views
Comment: C: BWA mem skip orientation RF/RR as there are not enough pairs
4.0 years ago by robert.murphy ▴ 90
3
votes
7
replies
5.7k
views
BWA mem skip orientation RF/RR as there are not enough pairs
alignment
updated 4.0 years ago by 35k • written 4.0 years ago by ▴ 90
0
votes
0
replies
2.8k
views
Comment: C: How best to pick kmer's for spades assembly?
4.0 years ago by robert.murphy ▴ 90
0
votes
1
reply
2.8k
views
Comment: C: How best to pick kmer's for spades assembly?
4.0 years ago by robert.murphy ▴ 90
0
votes
4
replies
2.8k
views
How best to pick kmer's for spades assembly?
Assembly
4.0 years ago by robert.murphy ▴ 90
0
votes
0
replies
859
views
Comment: C: Samtools stats -F showing filtering from when and under what parameters?
4.1 years ago by robert.murphy ▴ 90
0
votes
1
reply
859
views
Comment: C: Samtools stats -F showing filtering from when and under what parameters?
4.1 years ago by robert.murphy ▴ 90
2
votes
4
replies
859
views
Samtools stats -F showing filtering from when and under what parameters?
alignment
4.1 years ago by robert.murphy ▴ 90
0
votes
0
replies
4.9k
views
Comment: C: Why not merging?
4.1 years ago by robert.murphy ▴ 90
0
votes
0
replies
1.9k
views
Comment: C: Quallity trimming by phred score, how far is to far?
4.1 years ago by robert.murphy ▴ 90
0
votes
0
replies
1.9k
views
Comment: C: Quallity trimming by phred score, how far is to far?
4.1 years ago by robert.murphy ▴ 90
0
votes
1
reply
1.9k
views
Comment: C: Quallity trimming by phred score, how far is to far?
4.1 years ago by robert.murphy ▴ 90
0
votes
1
reply
1.9k
views
Comment: C: Quallity trimming by phred score, how far is to far?
4.1 years ago by robert.murphy ▴ 90
2
votes
7
replies
1.9k
views
Quallity trimming by phred score, how far is to far?
Assembly sequencing
updated 4.1 years ago by 147k • written 4.1 years ago by ▴ 90
0
votes
0
replies
637
views
Culture independent detection of bacterial biosynthetic gene clusters from microbiomes
genome metagenome BGC biosynthetic gene cluster
4.1 years ago by robert.murphy ▴ 90
1
vote
2
replies
1.3k
views
Normalization of raw Illumina reads.
sequencing Assembly
updated 4.1 years ago by 44k • written 4.1 years ago by ▴ 90
0
votes
1
reply
2.5k
views
Comment: C: SPAdes v3.14 unable to find files despite correct file path
4.2 years ago by robert.murphy ▴ 90
0
votes
5
replies
1.3k
views
Is it possible to supplement a gbk file with manual annotations?
annotation genome viral
updated 4.2 years ago by ★ 28k • written 4.2 years ago by ▴ 90
0
votes
0
replies
1.3k
views
Comment: C: Is it possible to supplement a gbk file with manual annotations?
4.2 years ago by robert.murphy ▴ 90
0
votes
1
reply
1.3k
views
Comment: C: Is it possible to supplement a gbk file with manuall annottions?
4.2 years ago by robert.murphy ▴ 90
0
votes
0
replies
2.5k
views
Comment: C: SPAdes v3.14 unable to find files despite correct file path
4.2 years ago by robert.murphy ▴ 90
0
votes
3
replies
2.5k
views
Comment: C: SPAdes v3.14 unable to find files despite correct file path
4.2 years ago by robert.murphy ▴ 90
0
votes
0
replies
2.5k
views
Comment: C: SPAdes v3.14 unable to find files despite correct file path
4.2 years ago by robert.murphy ▴ 90
0
votes
0
replies
2.5k
views
Comment: C: SPAdes v3.14 unable to find files despite correct file path
4.2 years ago by robert.murphy ▴ 90
1
vote
13
replies
2.5k
views
SPAdes v3.14 unable to find files despite correct file path
Assembly
updated 3.4 years ago by ▴ 50 • written 4.2 years ago by ▴ 90
0
votes
0
replies
499
views
Are there methods to identify a bacteria as anaerobic or aerobic through its whole genome?
genome
updated 4.2 years ago by 20 • written 4.3 years ago by ▴ 90
0
votes
0
replies
766
views
Lastal aligner not detecting queery sequences
alignment
4.2 years ago by robert.murphy ▴ 90
0
votes
1
reply
4.1k
views
Comment: C: Bowtie2 and BWA-MEM giving very different results in metagenomic data
4.2 years ago by robert.murphy ▴ 90
0
votes
0
replies
837
views
Use of BAMs mapped to assembly of all reads in metagenome binning.
binning genome metagenome
4.2 years ago by robert.murphy ▴ 90
0
votes
0
replies
1.2k
views
Comment: C: Is there a tool for creating publication quallity phylogenetic tree with metadat
4.3 years ago by robert.murphy ▴ 90
0
votes
0
replies
1.2k
views
Comment: C: Is there a tool for creating publication quallity phylogenetic tree with metadat
4.3 years ago by robert.murphy ▴ 90
0
votes
2
replies
1.2k
views
Comment: C: Is there a tool for creating publication quallity phylogenetic tree with metadat
4.3 years ago by robert.murphy ▴ 90
1
vote
7
replies
1.2k
views
Is there a tool for creating publication quallity phylogenetic tree with metadata associated with each leaf
alignment
updated 4.3 years ago by 3.2k • written 4.3 years ago by ▴ 90
4
votes
4
replies
2.8k
views
Scanpy vs DeSeq for single cell RNASeq DE gene analysis
RNA-Seq
updated 3.0 years ago by ▴ 10 • written 4.8 years ago by ▴ 90
0
votes
0
replies
640
views
Comment: C: Comparing two sets of 16s sequences to identify any identicle (within 97%) seque
4.6 years ago by robert.murphy ▴ 90
181 results • Page 3 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6