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Comment: C: index genome using haploid genome.fa or diploid genome.fa?
5.2 years ago by h.mon 35k
1
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2
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3.4k
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Comment: C: running RAxML and MrBayes over concatinated multiple sequence alignments
5.2 years ago by h.mon 35k
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1
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1.1k
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Answer: A: calculating consensus tree phylogeny
5.2 years ago by h.mon 35k
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1.9k
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Comment: C: Is there any tool available for sequence alignment concatenation and supermatrix
5.2 years ago by h.mon 35k
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1
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1.9k
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Comment: C: Is there any tool available for sequence alignment concatenation and supermatrix
5.2 years ago by h.mon 35k
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1.4k
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Answer: A: rRNA and bacteria: Absence and duplicates
5.2 years ago by h.mon 35k
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1.5k
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Comment: C: ORF finder v0.4.1
5.2 years ago by h.mon 35k
1
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1
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7.7k
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Comment: C: Using featureCount with a GFF file
5.2 years ago by h.mon 35k
2
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1
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7.7k
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Comment: C: Using featureCount with a GFF file
5.2 years ago by h.mon 35k
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1
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1.6k
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Answer: A: Convert abyss scaffolds to contigs
5.2 years ago by h.mon 35k
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8.5k
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Answer: A: HMMER: hmmscan ---> hmmsearch
5.2 years ago by h.mon 35k
0
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1
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5.5k
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Comment: C: bowtie2 install on ubuntu
updated 5.2 years ago by 44k • written 9.4 years ago by 35k
0
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1
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5.5k
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Comment: C: bowtie2 install on ubuntu
updated 5.2 years ago by 44k • written 9.4 years ago by 35k
0
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1
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5.5k
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Answer: A: bowtie2 install on ubuntu
updated 5.2 years ago by 44k • written 9.4 years ago by 35k
0
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1
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3.0k
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Comment: C: Counting abundance of each gene in SAM/BAM file
5.2 years ago by h.mon 35k
1
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1
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3.0k
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Comment: C: Counting abundance of each gene in SAM/BAM file
5.2 years ago by h.mon 35k
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1
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2.7k
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Comment: C: Failure in extracting reads from bam file due to unknown reference
5.2 years ago by h.mon 35k
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1
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2.4k
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Answer: A: Do anyone have 64 bit version of fastPHASE
updated 5.2 years ago by 44k • written 9.4 years ago by 35k
1
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1
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1.1k
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Comment: C: Detecting variants in mapped reads against 16S rRNA reference sequence
5.2 years ago by h.mon 35k
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0
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4.1k
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Comment: C: Hardware Recommendations: 1 Terabyte of RAM?
updated 5.2 years ago by 44k • written 9.5 years ago by 35k
1
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0
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4.3k
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Comment: Comment: NGS mapper that supports IUPAC reference
updated 2.2 years ago by 44k • written 9.5 years ago by 35k
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0
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5.8k
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Comment: C: BWA with multiple references
updated 5.2 years ago by 44k • written 9.5 years ago by 35k
1
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0
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2.2k
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Answer: A: IsoSeq full length de novo assembly using trinity
5.2 years ago by h.mon 35k
0
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1
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3.2k
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Answer: A: SNP-masking before short-read alignment to human genome
updated 5.2 years ago by 44k • written 9.5 years ago by 35k
0
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0
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9.5k
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Comment: C: Why you shouldn't normalize count data using gene-length AND library size for co
5.2 years ago by h.mon 35k
1
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1
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2.2k
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Comment: C: IsoSeq full length de novo assembly using trinity
5.2 years ago by h.mon 35k
1
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0
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938
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Comment: C: Plotting range/type of discordance in alignment data
5.2 years ago by h.mon 35k
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0
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2.4k
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Comment: C: Is the most recent Normd version (1.3) missing the executable to remove badly al
5.2 years ago by h.mon 35k
2
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0
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1.9k
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Comment: C: flexbar for many files
5.2 years ago by h.mon 35k
0
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1
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9.5k
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Comment: C: Why you shouldn't normalize count data using gene-length AND library size for co
5.2 years ago by h.mon 35k
1
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0
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1.2k
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Answer: A: hmmsearch against pfam database
5.2 years ago by h.mon 35k
1
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1
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2.1k
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Comment: C: Error : viGEN : bowtie2 Alignment - No input read files were valid
5.2 years ago by h.mon 35k
3
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1
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14k
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Comment: C: What's the difference between enrichKEGG and gseKEGG
5.2 years ago by h.mon 35k
2
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0
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1.2k
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Answer: A: How to use anvio's gzipped HMM externally with HMMER?
5.2 years ago by h.mon 35k
1
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0
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954
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Comment: C: Concatenate FASTA seqs accroding to species
5.2 years ago by h.mon 35k
4
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1
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2.6k
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Answer: C: What is in your opinion the current state-of-the-art sequencing platform for gen
5.2 years ago by h.mon 35k
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0
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881
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Comment: C: Base Pair Distance vs. Edit Distance
5.2 years ago by h.mon 35k
2
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1
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14k
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Answer: A: What's the difference between enrichKEGG and gseKEGG
5.2 years ago by h.mon 35k
1
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1
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5.6k
views
Comment: C: Running STAR with --twopassMode Basic
5.2 years ago by h.mon 35k
1
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1
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870
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Comment: C: How to do RNA-seq assembly to a reference genome for the first time?
5.2 years ago by h.mon 35k
1
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1
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2.0k
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Comment: C: calculate the minimum free energy of RNA structures
5.2 years ago by h.mon 35k
0
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0
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7.5k
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Answer: A: Joining vs merging paired ended reads
5.2 years ago by h.mon 35k
1
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1
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1.6k
views
Comment: C: abyss config/scaffold fasta file headers
5.2 years ago by h.mon 35k
1
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0
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727
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Answer: C: Online tool or software to remove adaptors from MISeq data
5.2 years ago by h.mon 35k
1
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1
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3.2k
views
Comment: C: How to save and reload a GRanges object with metadata
5.2 years ago by h.mon 35k
0
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1
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1.1k
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Comment: C: How to retrieve/extract specific intergenic regions?
5.2 years ago by h.mon 35k
1
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2
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4.5k
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Comment: C: Taxonomic sequence classification for shotgun metagenomics, compatible with down
5.2 years ago by h.mon 35k
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0
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3.0k
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Comment: C: BWA not reporting all similar alignments
5.2 years ago by h.mon 35k
1
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0
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4.2k
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Answer: A: How to introduce artificial mutation in bam
5.2 years ago by h.mon 35k
0
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0
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3.8k
views
Comment: C: obtain a simulated bam file for variants on existed bam file
5.2 years ago by h.mon 35k
4,239 results • Page 12 of 85
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