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News: Bioinformatics Open Source Conference 2021
OBF BOSC Conference
3.6 years ago by Chris Fields ★ 2.2k
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3.9k
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Comment: C: Illumina polishing after PacBio assembly and polishing?
4.4 years ago by Chris Fields ★ 2.2k
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1
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3.0k
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Comment: C: Large difference in mapping times for ChIP data
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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12k
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Comment: C: Paired-End Bam Files
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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1.9k
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Comment: C: high depth Illumina samples from 1000 Genomes
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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1.8k
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Answer: A: Ideal size of a library for miRNA ?
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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5.3k
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Comment: C: Compare different RNASeq assemblers
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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14k
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Answer: A: linking ensembl gene ID to GO term?
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.2k
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2.9k
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Answer: Answer: How to account for multiple mapping reads while calling variants?
updated 2.3 years ago by 44k • written 8.8 years ago by ★ 2.2k
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Answer: A: Long reads Assembly Algorithms
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.2k
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12k
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Answer: A: problems in hg19 and b37 compatibility
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.2k
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1
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6.1k
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Answer: A: [Samtools] How to extract reads matching a given sequence
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.2k
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Answer: A: Remove duplicates in featurecounts
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.2k
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3.3k
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Comment: C: setting GBrowse database and query GFF3
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.2k
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3.9k
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Comment: C: 0 mapping hits for blast2go
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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3.9k
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Answer: A: 0 mapping hits for blast2go
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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2.3k
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Answer: A: Does mirna-seq is stranded?
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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1
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11k
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Comment: C: Paired-End Reads Alignment For Variant Calling ?
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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8.5k
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Comment: C: bedtools: extracting no coverage regions
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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5.0k
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Answer: A: Problem Running Trinity TransDecoder
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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8.5k
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Answer: A: bedtools: extracting no coverage regions
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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6.7k
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Comment: C: Bwa mem is exiting with segmentation fault for large contigs (> 0.4Mbp)
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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1
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2.5k
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Comment: C: Where in the source code for SeqIO.write() does the function write the IDs and a
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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Comment: C: How to know that your RNA-seq is stranded or not?
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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1
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12k
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Comment: C: How detrimental are duplicate reads in RNAseq experiments?
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
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12k
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Comment: C: How detrimental are duplicate reads in RNAseq experiments?
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 2.2k
2
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1
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12k
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Answer: A: How detrimental are duplicate reads in RNAseq experiments?
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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42k
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Answer: A: Will Python Take The Place Of R?
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
3
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1
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6.7k
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Comment: C: Bwa mem is exiting with segmentation fault for large contigs (> 0.4Mbp)
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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3.0k
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Answer: A: What happens to intermediate Trinity files when assembly terminated pre-completi
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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0
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16k
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Answer: Answer: Extracting regions from .bam file using a .gff or .gtf file
updated 3.2 years ago by 44k • written 10.6 years ago by ★ 2.2k
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1
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2.5k
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Answer: A: Where in the source code for SeqIO.write() does the function write the IDs and a
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
13
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Answer: A: What is the difference between GEO and SRA ncbi databases?
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.2k
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1
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2.3k
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Comment: C: good scaffolder tool !
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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1
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3.0k
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Answer: A: HOMER Bioinformatics manual/website
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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1
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2.3k
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Comment: C: good scaffolder tool !
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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4.0k
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Comment: C: Looking for ways to download ChIP-seq datasets programmatically in a pipeline
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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4.0k
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Comment: C: Looking for ways to download ChIP-seq datasets programmatically in a pipeline
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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0
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4.0k
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Answer: A: Looking for ways to download ChIP-seq datasets programmatically in a pipeline
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 2.2k
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0
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5.1k
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Comment: C: Maker output - Easy way to find actual gene names?
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
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5.0k
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Comment: C: De novo genome assembly strategy
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
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2.6k
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Comment: C: Filtering out broad peaks
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
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1
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2.7k
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Answer: A: 50PE vs 100PE reads to assemble a de novo transcriptome
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
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2.7k
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Comment: C: 50PE vs 100PE reads to assemble a de novo transcriptome
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
4
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1
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13k
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Answer: A: Tabular fields of DIAMOND.m8 file
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
3
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1
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11k
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Answer: A: comparing single cell RNA-seq and bulk RNA-seq results
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
3
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1
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2.4k
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Answer: A: Stop BLAST search on any hit
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
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1
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1.5k
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Answer: A: Gene expression with assembly and without !!
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
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0
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2.7k
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Comment: C: RNAseq of total RNA
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
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1
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2.7k
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Answer: A: RNAseq of total RNA
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 2.2k
242 results • Page 1 of 5
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