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2
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Answer: Answer: Parallel AUGUSTUS Execution via GNU Parallel
6 weeks ago by ole.tange ★ 4.5k
367
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82
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147k
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Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel next-gen ngs
updated 8 months ago by ▴ 320 • written 11.8 years ago by ★ 4.5k
0
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Answer: Answer: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
19 months ago by ole.tange ★ 4.5k
3
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0
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2.3k
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Answer: Answer: How do I use GNU parallel with two inputs?
19 months ago by ole.tange ★ 4.5k
1
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0
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2.3k
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Comment: Comment: How do I use GNU parallel with two inputs?
19 months ago by ole.tange ★ 4.5k
1
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1.1k
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Comment: Comment: Problem adding file names to fasta headers in multiple directories using awk
2.1 years ago by ole.tange ★ 4.5k
2
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0
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1.2k
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Answer: Answer: Automating pipeline with Parallel, read files in separate folders
2.5 years ago by ole.tange ★ 4.5k
0
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0
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2.6k
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Comment: Comment: why do i get this gnu parallel warning (Trimmomatic/Bowtie2)
3.0 years ago by ole.tange ★ 4.5k
1
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1
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2.6k
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Comment: Comment: why do i get this gnu parallel warning (Trimmomatic/Bowtie2)
3.0 years ago by ole.tange ★ 4.5k
1
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0
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2.3k
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Comment: Comment: Help understanding "sed" command in a loop
3.0 years ago by ole.tange ★ 4.5k
0
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1
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1.2k
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Answer: Answer: Unicycler and GNU parallel
3.2 years ago by ole.tange ★ 4.5k
0
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1
reply
649
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Determine where an interleaved FASTQ record starts
fastq
updated 3.3 years ago by 21k • written 3.3 years ago by ★ 4.5k
2
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2
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2.8k
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Answer: A: Using GNU parallel to speed up merging VCFs with bcftools
3.8 years ago by ole.tange ★ 4.5k
1
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1
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2.7k
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Comment: C: concatenate all the files with matching prefix in a directory of several files
3.8 years ago by ole.tange ★ 4.5k
1
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0
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2.7k
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Answer: A: concatenate all the files with matching prefix in a directory of several files
3.8 years ago by ole.tange ★ 4.5k
4
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3
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3.5k
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Answer: A: Is it possible to run haplotypecaller in gnu parallel ?
3.8 years ago by ole.tange ★ 4.5k
0
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1
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3.5k
views
Comment: C: Is it possible to run haplotypecaller in gnu parallel ?
3.8 years ago by ole.tange ★ 4.5k
0
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0
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854
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Comment: C: Using Parallel GNU
3.9 years ago by ole.tange ★ 4.5k
1
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0
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147k
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Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
4.0 years ago by ole.tange ★ 4.5k
3
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0
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1.5k
views
Answer: A: Is there anyway to get a unix parallel command to write to standard output
4.0 years ago by ole.tange ★ 4.5k
3
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0
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9.6k
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Answer: A: GNU parallel command with several multiple arguments
4.3 years ago by ole.tange ★ 4.5k
1
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0
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11k
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Comment: C: Bulk download of entire BioProject SRA
4.3 years ago by ole.tange ★ 4.5k
2
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0
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1.5k
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Answer: A: How to set sleep in GNU parallel in a esearch/efetch script
4.3 years ago by ole.tange ★ 4.5k
1
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0
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4.3k
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Answer: A: How do I use bash loop to map with Salmon on files in multiple folders
4.4 years ago by ole.tange ★ 4.5k
3
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0
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147k
views
Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by 44k • written 10.2 years ago by ★ 4.5k
0
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0
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147k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by 44k • written 9.5 years ago by ★ 4.5k
0
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0
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147k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by 44k • written 9.9 years ago by ★ 4.5k
0
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0
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147k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by 44k • written 9.4 years ago by ★ 4.5k
0
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1
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5.9k
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Comment: C: How to rename multiple fastq files
4.8 years ago by ole.tange ★ 4.5k
0
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0
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147k
views
Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.9 years ago by 44k • written 9.9 years ago by ★ 4.5k
2
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1
reply
147k
views
Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.9 years ago by 44k • written 11.8 years ago by ★ 4.5k
0
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0
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147k
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Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.0 years ago by ole.tange ★ 4.5k
7
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1
reply
2.3k
views
Answer: A: Calculating Shannon entropy for RNA sequences in multi-fasta using rnaentropy
updated 5.0 years ago by 12k • written 5.0 years ago by ★ 4.5k
2
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0
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9.5k
views
Comment: C: Most effective way to merge individual VCF files into VCF files merged by chromo
updated 5.1 years ago by 44k • written 10.5 years ago by ★ 4.5k
1
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0
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7.3k
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Comment: C: Multiple Bam To Multiple Sam
updated 5.1 years ago by 44k • written 11.6 years ago by ★ 4.5k
1
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0
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4.8k
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Answer: A: bwa mem: fail to locate the index files
5.3 years ago by ole.tange ★ 4.5k
3
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1
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4.1k
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Answer: A: using GNU parallel for bwa mem and samtools
5.3 years ago by ole.tange ★ 4.5k
1
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0
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147k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.6 years ago by ole.tange ★ 4.5k
0
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0
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3.8k
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Comment: C: How to extract filename and change text in the same file
5.7 years ago by ole.tange ★ 4.5k
0
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2
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3.8k
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Comment: C: How to extract filename and change text in the same file
5.7 years ago by ole.tange ★ 4.5k
2
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0
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147k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.7 years ago by ole.tange ★ 4.5k
0
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0
replies
147k
views
Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.8 years ago by ole.tange ★ 4.5k
2
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1
reply
11k
views
Comment: C: How to speed up trimming using trim galorer
5.8 years ago by ole.tange ★ 4.5k
0
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0
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2.4k
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Comment: C: How to run SNPEff jar for a batch of VCF files using GNU parallel tool?
5.9 years ago by ole.tange ★ 4.5k
13
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0
replies
3.0k
views
Tool: Book: GNU Parallel 2018 - for beginners and advanced users
parallel ngs
updated 17 months ago by 44k • written 6.1 years ago by ★ 4.5k
0
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0
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2.2k
views
Comment: C: how to add the sample name to the end read headers
6.2 years ago by ole.tange ★ 4.5k
0
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1
reply
1.8k
views
Answer: A: HOMER parallel annotation for big .bed file
6.4 years ago by ole.tange ★ 4.5k
0
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0
replies
8.7k
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Comment: C: Trim_galore on multiple fast.qz files: syntax problem
6.4 years ago by ole.tange ★ 4.5k
1
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1
reply
8.7k
views
Answer: A: Trim_galore on multiple fast.qz files: syntax problem
6.4 years ago by ole.tange ★ 4.5k
5
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2
replies
9.0k
views
Answer: A: GNU parallel error: Command line too long
6.4 years ago by ole.tange ★ 4.5k
113 results • Page 1 of 3
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