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1.9k
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Answer: A: Can a JBrowse track be downloaded?
6.3 years ago by cmdcolin ★ 4.0k
1
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1
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7.0k
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Answer: A: How to order a gff3 file by coordinates
6.3 years ago by cmdcolin ★ 4.0k
1
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0
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1.8k
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Comment: A: Jbrowse configuration file for specific usage
6.3 years ago by cmdcolin ★ 4.0k
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0
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2.6k
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Answer: A: Web apollo installation not working
6.3 years ago by cmdcolin ★ 4.0k
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0
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2.4k
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Comment: C: parsing gff3 file
6.3 years ago by cmdcolin ★ 4.0k
1
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1
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2.4k
views
Comment: C: parsing gff3 file
6.3 years ago by cmdcolin ★ 4.0k
1
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1
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2.4k
views
Comment: C: parsing gff3 file
6.3 years ago by cmdcolin ★ 4.0k
1
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14
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6.3k
views
Creating a dotplot from LASTZ output
lastz dotplot
6.4 years ago by cmdcolin ★ 4.0k
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0
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32k
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Comment: C: How Do I Convert From Bed Format To Gff Format?
6.4 years ago by cmdcolin ★ 4.0k
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0
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12k
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Comment: C: Get number of variations in a huge VCF using Tabix?
6.4 years ago by cmdcolin ★ 4.0k
4
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1
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7.1k
views
Answer: A: Interesting/useful/beautiful bio sequence viz tools
6.7 years ago by cmdcolin ★ 4.0k
1
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0
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4.0k
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Comment: C: bedtools getfasta chromosome not found
6.7 years ago by cmdcolin ★ 4.0k
2
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1
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6.8k
views
Answer: C: Samtools faidx problem
6.9 years ago by cmdcolin ★ 4.0k
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0
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3.1k
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Answer: A: Add gene annotation/information to CNV plot in R
7.0 years ago by cmdcolin ★ 4.0k
0
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0
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1.9k
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Comment: C: Universal Operon Database
7.1 years ago by cmdcolin ★ 4.0k
0
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0
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3.4k
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Comment: C: Scafolding and gap filling
7.1 years ago by cmdcolin ★ 4.0k
0
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1
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2.8k
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Comment: C: Rescaffolding a genome assembly?
7.2 years ago by cmdcolin ★ 4.0k
0
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1
reply
9.9k
views
Comment: C: Repeatmasker, Can't locate Text/Soundex.pm
7.3 years ago by cmdcolin ★ 4.0k
1
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1
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9.7k
views
Answer: A: [E::hts_idx_push] chromosome blocks not continuous :Indexing of gff3 files using
7.3 years ago by cmdcolin ★ 4.0k
1
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0
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3.5k
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Comment: C: Blast Xml For Multiple Databases
7.3 years ago by cmdcolin ★ 4.0k
0
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1
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2.3k
views
Comment: C: Ideal settings for blasting a protein/cdna against a genome?
7.3 years ago by cmdcolin ★ 4.0k
1
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3
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2.3k
views
Ideal settings for blasting a protein/cdna against a genome?
blast exonerate
7.3 years ago by cmdcolin ★ 4.0k
0
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1
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2.5k
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Comment: C: Rename an existing BLAST database
7.3 years ago by cmdcolin ★ 4.0k
2
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3
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2.5k
views
Rename an existing BLAST database
blast
updated 7.3 years ago by ★ 2.7k • written 7.3 years ago by ★ 4.0k
1
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0
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7.4k
views
Answer: A: List of np-hard problems in biology/bioinformatics
7.4 years ago by cmdcolin ★ 4.0k
0
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1
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7.2k
views
Comment: C: How to correctly use E-fetch from E-utilities?
7.4 years ago by cmdcolin ★ 4.0k
1
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0
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9.0k
views
Comment: C: Ucsc/Ensembl Bam Converter?
7.4 years ago by cmdcolin ★ 4.0k
0
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0
replies
2.5k
views
Answer: A: retrieve genomic coordinate on mRNA
7.4 years ago by cmdcolin ★ 4.0k
0
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0
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39k
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Answer: A: Efficient And Fastest Way To Sort Large (>100Gb) Bam Files?
7.4 years ago by cmdcolin ★ 4.0k
1
vote
1
reply
1.4k
views
Comment: C: Teaching a course on RESTful microservices; looking for example projects
7.4 years ago by cmdcolin ★ 4.0k
0
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0
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4.7k
views
Comment: C: How large are 1000genomes vcf files?
7.4 years ago by cmdcolin ★ 4.0k
2
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1
reply
2.8k
views
Answer: A: Rescaffolding a genome assembly?
7.4 years ago by cmdcolin ★ 4.0k
7
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10
replies
2.8k
views
Rescaffolding a genome assembly?
abyss scaffolding
7.4 years ago by cmdcolin ★ 4.0k
0
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0
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2.0k
views
Comment: C: Generate syntenic blocks between two vertebrates
7.4 years ago by cmdcolin ★ 4.0k
0
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0
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4.7k
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Comment: C: How large are 1000genomes vcf files?
7.4 years ago by cmdcolin ★ 4.0k
0
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1
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7.5k
views
Comment: C: BAM compression: .tar.gz = same size as before?
7.4 years ago by cmdcolin ★ 4.0k
4
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1
reply
4.7k
views
Comment: C: How large are 1000genomes vcf files?
7.4 years ago by cmdcolin ★ 4.0k
3
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0
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7.5k
views
Comment: C: BAM compression: .tar.gz = same size as before?
7.4 years ago by cmdcolin ★ 4.0k
0
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0
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2.5k
views
Comment: C: Reliable alignment tool for similar sequences of similar length other than Mumme
7.4 years ago by cmdcolin ★ 4.0k
0
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1
reply
2.8k
views
Comment: C: Rescaffolding a genome assembly?
7.5 years ago by cmdcolin ★ 4.0k
0
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1
reply
2.8k
views
Comment: C: Rescaffolding a genome assembly?
7.5 years ago by cmdcolin ★ 4.0k
0
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0
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5.0k
views
Comment: C: Web 2.0 In Biological Research And Databases
7.5 years ago by cmdcolin ★ 4.0k
0
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0
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6.4k
views
Comment: C: Gff file error in HTSeq-count
7.5 years ago by cmdcolin ★ 4.0k
1
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1
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3.8k
views
Answer: A: Could someone suggest a fast and efficient implementation of a glocal (semi-glob
7.5 years ago by cmdcolin ★ 4.0k
1
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0
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6.1k
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Comment: C: Trying To Pull Regions From An Online Bam File Without Downloading
7.5 years ago by cmdcolin ★ 4.0k
0
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0
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5.1k
views
Answer: A: Mapping between genomic coordinates to transcriptomic coordinates
7.5 years ago by cmdcolin ★ 4.0k
1
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0
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3.7k
views
Answer: A: from GI or protein ID to genome coordinates
7.5 years ago by cmdcolin ★ 4.0k
0
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2
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2.0k
views
Generate syntenic blocks between two vertebrates
synteny lastz alignment
updated 7.5 years ago by ▴ 340 • written 7.5 years ago by ★ 4.0k
1
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0
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25k
views
Comment: C: How To Convert Blast Results To Gff
7.5 years ago by cmdcolin ★ 4.0k
0
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0
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3.7k
views
Comment: C: from GI or protein ID to genome coordinates
7.6 years ago by cmdcolin ★ 4.0k
541 results • Page 9 of 11
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