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Parse ncbiRefSeq (other like) annotations
refseq
updated 2.5 years ago by ★ 3.8k • written 2.5 years ago by ▴ 330
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Comment: Comment: jellyfish count discrepancy between results obtained with and without -C optio
2.9 years ago by onestop_data ▴ 330
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Comment: Comment: BAM to Fastq
2.9 years ago by onestop_data ▴ 330
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Answer: Answer: How to count fasta sequences efficiently using (or not ) biopython
2.9 years ago by onestop_data ▴ 330
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Answer: Answer: Is There An Easy Way To Properly Orient Sequences For Clustalw Alignment?
2.9 years ago by onestop_data ▴ 330
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Answer: Answer: K-mer usage in metagenome assemblies
3.7 years ago by onestop_data ▴ 330
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Answer: Answer: Downsampling fastq reads
3.7 years ago by onestop_data ▴ 330
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1.9k
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Comment: C: Multiple sequence alignment clean-up
4.6 years ago by onestop_data ▴ 330
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Answer: A: Multiple sequence alignment clean-up
4.6 years ago by onestop_data ▴ 330
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Comment: C: Binning tools for metagenomics
4.7 years ago by onestop_data ▴ 330
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2.9k
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Answer: A: Binning tools for metagenomics
4.7 years ago by onestop_data ▴ 330
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3.7k
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Answer: A: metabat installation problem with conda
4.7 years ago by onestop_data ▴ 330
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3.3k
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Answer: A: Genome size estimation using Kmergenie
4.7 years ago by onestop_data ▴ 330
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1.4k
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Answer: A: Cross assembly of metagenomics
4.7 years ago by onestop_data ▴ 330
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5.2k
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Answer: A: Reads Simulation and Read Simulator
4.8 years ago by onestop_data ▴ 330
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3.4k
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Answer: A: Paired-end metagenomics data for MEGAN analysis
4.8 years ago by onestop_data ▴ 330
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Comment: C: Taxonomic analysis of metagenomic data
4.8 years ago by onestop_data ▴ 330
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Answer: A: MetaBat 2 does not produce a bin while running ok
4.8 years ago by onestop_data ▴ 330
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1.0k
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Answer: A: Sequences alignment program
4.8 years ago by onestop_data ▴ 330
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Comment: C: Virsorter running error
4.8 years ago by onestop_data ▴ 330
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Answer: A: How to calculate the entropy of a DNA sequence - and/or it's complexity
4.8 years ago by onestop_data ▴ 330
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1.1k
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Answer: A: Plasmid and Phage identification package
4.8 years ago by onestop_data ▴ 330
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2.1k
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Answer: A: Virsorter running error
4.8 years ago by onestop_data ▴ 330
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1.4k
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Answer: A: Functional Metagenomic Analysis Tools
4.8 years ago by onestop_data ▴ 330
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1.7k
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Comment: C: How can I discover gene function on a bacterial genome
4.8 years ago by onestop_data ▴ 330
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1.7k
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Comment: C: How can I discover gene function on a bacterial genome
4.8 years ago by onestop_data ▴ 330
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Comment: Comment: How can I discover gene function on a bacterial genome
4.8 years ago by onestop_data ▴ 330
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5.0k
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Answer: A: convert gbk to fasta
4.8 years ago by onestop_data ▴ 330
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1.2k
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Answer: A: How to functional annotation bins (the output of MaxBin) of metagenomics
4.8 years ago by onestop_data ▴ 330
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2.5k
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Comment: C: bioinformatics tool for COG assignment
4.8 years ago by onestop_data ▴ 330
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2.9k
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Answer: A: Check contamination in assembly
4.8 years ago by onestop_data ▴ 330
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2.5k
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Answer: A: bioinformatics tool for COG assignment
4.8 years ago by onestop_data ▴ 330
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Answer: A: How to assemble viral genomes when my data contains host DNA as well
4.8 years ago by onestop_data ▴ 330
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1
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4.4k
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Answer: A: kraken2-build command not found
4.8 years ago by onestop_data ▴ 330
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8.3k
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Answer: A: Problem with Prokka to run tbl2asn
4.8 years ago by onestop_data ▴ 330
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3.4k
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Answer: A: construction of draft genome from the contigs
4.8 years ago by onestop_data ▴ 330
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1.9k
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Answer: A: Kraken_results or Kraken_report? Which file to consider ?
4.8 years ago by onestop_data ▴ 330
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978
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Answer: A: Metagenomics Analysis Pipeline
4.8 years ago by onestop_data ▴ 330
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2.4k
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Answer: A: Getting length of every interval in a bed file
4.8 years ago by onestop_data ▴ 330
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2.7k
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Comment: C: There are any way to use a script for feed emboss with fasta sequence?
4.8 years ago by onestop_data ▴ 330
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2.7k
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Comment: C: There are any way to use a script for feed emboss with fasta sequence?
4.8 years ago by onestop_data ▴ 330
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2.1k
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Answer: A: bcftools sec for multiple files
4.8 years ago by onestop_data ▴ 330
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2.5k
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Comment: C: minimap2 cigar entry
4.8 years ago by onestop_data ▴ 330
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1.4k
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Comment: C: Functional Metagenomic Analysis Tools
4.8 years ago by onestop_data ▴ 330
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968
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Answer: A: ABySS Bloom filter false positive rate
4.8 years ago by onestop_data ▴ 330
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1.4k
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Answer: A: Extracting Multiple Mapped reads from Bismark output
4.8 years ago by onestop_data ▴ 330
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1.2k
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Comment: C: How do I summarize coverage across many genomes to inform filtering cutoffs?
4.8 years ago by onestop_data ▴ 330
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1.2k
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Answer: A: How do I summarize coverage across many genomes to inform filtering cutoffs?
4.8 years ago by onestop_data ▴ 330
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3.3k
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Answer: A: problem with installing and running bcftools
4.8 years ago by onestop_data ▴ 330
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2.1k
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Comment: C: Calculate coverage from SAM file
4.8 years ago by onestop_data ▴ 330
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