Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
votes
6
replies
2.6k
views
DiffBind reports no significant differentially enriched peaks
ChIP-seq DiffBind
updated 13 months ago by • 0 • written 2.1 years ago by ▴ 810
0
votes
1
reply
666
views
Comment: Comment: Deseq2 colData for single condition
14 months ago by Marco Pannone ▴ 810
0
votes
0
replies
2.9k
views
Comment: Comment: PolyA and PolyG sequences in FastQC/MultiQC report
15 months ago by Marco Pannone ▴ 810
0
votes
1
reply
905
views
Comment: Comment: Heatmap ChIP-seq average signal
15 months ago by Marco Pannone ▴ 810
1
vote
3
replies
905
views
Heatmap ChIP-seq average signal
chip-seq heatmap deeptools
updated 15 months ago by ★ 1.8k • written 15 months ago by ▴ 810
0
votes
0
replies
1.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
15 months ago by Marco Pannone ▴ 810
0
votes
1
reply
1.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
15 months ago by Marco Pannone ▴ 810
0
votes
1
reply
1.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
16 months ago by Marco Pannone ▴ 810
0
votes
0
replies
1.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
16 months ago by Marco Pannone ▴ 810
0
votes
1
reply
1.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
16 months ago by Marco Pannone ▴ 810
0
votes
1
reply
1.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
16 months ago by Marco Pannone ▴ 810
1
vote
13
replies
1.8k
views
Unusual pattern in heatmap from ChIP-seq
chip-seq heatmap deeptools
15 months ago by Marco Pannone ▴ 810
0
votes
1
reply
854
views
Comment: Comment: Extract gene coordinates UCSC Table Browser
16 months ago by Marco Pannone ▴ 810
0
votes
0
replies
854
views
Comment: Comment: Extract gene coordinates UCSC Table Browser
16 months ago by Marco Pannone ▴ 810
0
votes
1
reply
854
views
Comment: Comment: Extract gene coordinates UCSC Table Browser
16 months ago by Marco Pannone ▴ 810
2
votes
6
replies
854
views
Extract gene coordinates UCSC Table Browser
ucsc table browser
updated 16 months ago by 147k • written 16 months ago by ▴ 810
0
votes
0
replies
1.4k
views
Comment: Comment: Active enhancers for mm39
19 months ago by Marco Pannone ▴ 810
0
votes
1
reply
1.4k
views
Comment: Comment: Active enhancers for mm39
20 months ago by Marco Pannone ▴ 810
4
votes
6
replies
1.4k
views
Active enhancers for mm39
bed coordinates enhancers mm39
19 months ago by Marco Pannone ▴ 810
0
votes
1
reply
926
views
Comment: Comment: Ensembl equivalent of refseq transcript fasta
21 months ago by Marco Pannone ▴ 810
0
votes
1
reply
1.3k
views
Comment: Comment: Merge common elements in R
21 months ago by Marco Pannone ▴ 810
2
votes
1
reply
496
views
Distribution of DEGs according to gene length
distribution RNA-seq
updated 21 months ago by 44k • written 21 months ago by ▴ 810
1
vote
1
reply
1.4k
views
Comment: Comment: FPKM file differentilly gene anaylsis
23 months ago by Marco Pannone ▴ 810
2
votes
2
replies
797
views
Statistic analysis on overlap between RNA-seq and ChIP-seq dataset
ChIP-seq RNA-seq
updated 23 months ago by 11k • written 23 months ago by ▴ 810
0
votes
1
reply
1.3k
views
Comment: Comment: Any good tools for biological annotation of ChIP-seq broadpeak (H3K9me3, H3K27me
23 months ago by Marco Pannone ▴ 810
0
votes
1
reply
1.3k
views
Comment: Comment: upload sc rna seq file into R
2.0 years ago by Marco Pannone ▴ 810
0
votes
1
reply
2.7k
views
Comment: Comment: DeSeq2 "some values in assay are negative"
2.0 years ago by Marco Pannone ▴ 810
1
vote
0
replies
889
views
Comment: Comment: Quantifying Peak Height Difference in ATAC-seq
2.0 years ago by Marco Pannone ▴ 810
0
votes
1
reply
2.7k
views
Comment: Comment: DeSeq2 "some values in assay are negative"
2.0 years ago by Marco Pannone ▴ 810
0
votes
1
reply
934
views
Comment: Comment: minimum number of genes - gene ontology/reactome analysis
2.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
2.7k
views
Comment: Comment: DeSeq2 "some values in assay are negative"
2.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
934
views
Comment: Comment: minimum number of genes - gene ontology/reactome analysis
2.1 years ago by Marco Pannone ▴ 810
3
votes
2
replies
1.8k
views
Answer: Answer: Multimapped reads in STAR alignment and subread::featureCounts()
2.1 years ago by Marco Pannone ▴ 810
0
votes
0
replies
466
views
Comment: Comment: Get pathways containing input genes; Reactome Database
2.1 years ago by Marco Pannone ▴ 810
1
vote
0
replies
675
views
Comment: Comment: Convert ENSEMBL peak coordinates to the UCSC
2.1 years ago by Marco Pannone ▴ 810
1
vote
1
reply
1.2k
views
Comment: Comment: DESeq2 calculate mean for each genotype
2.1 years ago by Marco Pannone ▴ 810
2
votes
1
reply
954
views
Comment: Comment: How can I create a ciclo for in bash to merge each R1 fastq and R2 fastq in a si
2.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
3.3k
views
Comment: Comment: HTSeq-Count: no_feature too high?
2.1 years ago by Marco Pannone ▴ 810
0
votes
0
replies
3.3k
views
Comment: Comment: HTSeq-Count: no_feature too high?
2.1 years ago by Marco Pannone ▴ 810
0
votes
2
replies
3.3k
views
Comment: Comment: HTSeq-Count: no_feature too high?
2.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
3.3k
views
Comment: Comment: HTSeq-Count: no_feature too high?
2.1 years ago by Marco Pannone ▴ 810
2
votes
0
replies
2.6k
views
Comment: Comment: Should I merge my technical replicates for bulk RNA seq?
2.1 years ago by Marco Pannone ▴ 810
2
votes
3
replies
1.1k
views
Answer: Answer: Hisat2 doesn't map to all chomosomes
2.1 years ago by Marco Pannone ▴ 810
1
vote
1
reply
1.1k
views
Comment: Comment: Interpreting GSEA results (Plots)?
2.1 years ago by Marco Pannone ▴ 810
0
votes
0
replies
593
views
Comment: Comment: HTseq error and 0kb output file
2.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
862
views
Comment: Comment: How to find DEG with deseq2 in R
2.1 years ago by Marco Pannone ▴ 810
1
vote
0
replies
1.0k
views
Comment: Comment: Venn Diagram output is missing
2.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
1.0k
views
Comment: Comment: Change window size in wiggle file.
2.1 years ago by Marco Pannone ▴ 810
0
votes
0
replies
1.3k
views
Comment: Comment: Handling Multiple Sequencing Runs in scRNA-seq
2.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
1.0k
views
Answer: Answer: Change window size in wiggle file.
2.1 years ago by Marco Pannone ▴ 810
194 results • Page 1 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6