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Comment:
C: How can I remove the outliers from a boxplot and fill the groups?
4.4 years ago by
dpc
▴ 250
0
votes
0
replies
3.0k
views
Comment:
C: How to extract out specific distances from a distance matrix?
4.4 years ago by
dpc
▴ 250
0
votes
0
replies
3.0k
views
Comment:
C: How to extract out specific distances from a distance matrix?
4.4 years ago by
dpc
▴ 250
1
vote
5
replies
1.2k
views
How can I extract out lines that contains 'g__' at their end along with the first two line headers? (i.e. only the genus level OTU from metaphlan out…
bash command
4.4 years ago by
dpc
▴ 250
0
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0
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1.2k
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Comment:
C: How can I extract out lines that contains 'g__' at their end? (i.e. only the gen
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
1.2k
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Comment:
C: How can I extract out lines that contains 'g__' at their end? (i.e. only the gen
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
3.0k
views
Comment:
C: How to extract out specific distances from a distance matrix?
4.4 years ago by
dpc
▴ 250
3
votes
7
replies
2.1k
views
Can I use pseudocounts for differential abundance of OTUs?
deseq
updated 4.4 years ago by
antonioggsousa
3.2k • written 4.4 years ago by
dpc
▴ 250
3
votes
9
replies
3.0k
views
How to extract out specific distances from a distance matrix?
wgs
phyloseq
updated 4.4 years ago by
antonioggsousa
3.2k • written 4.4 years ago by
dpc
▴ 250
0
votes
0
replies
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
0
votes
0
replies
3.0k
views
Comment:
C: How to extract out specific distances from a distance matrix?
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
1
vote
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
2
votes
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
1
vote
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
2
votes
2
replies
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
1
vote
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
1
vote
1
reply
8.8k
views
Comment:
C: How to generate Beta diversity boxplot from phyloseq object?
4.4 years ago by
dpc
▴ 250
2
votes
2
replies
6.1k
views
How to extract to columns from a phyloseq sample_data object?
phyloseq
updated 4.4 years ago by
antonioggsousa
3.2k • written 4.4 years ago by
dpc
▴ 250
25
votes
25
replies
8.8k
views
How to generate Beta diversity boxplot from phyloseq object?
phyloseq
beta diversity
metagenomics
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
7.3k
views
Comment:
C: METAPHLAN: Relative abundance to read count
4.4 years ago by
dpc
▴ 250
5
votes
4
replies
1.6k
views
bash script for catenating many paired end files
catenation
updated 4.4 years ago by
Mark
★ 1.6k • written 4.5 years ago by
dpc
▴ 250
0
votes
1
reply
7.3k
views
Comment:
C: METAPHLAN: Relative abundance to read count
4.4 years ago by
dpc
▴ 250
0
votes
0
replies
7.3k
views
Comment:
C: METAPHLAN: Relative abundance to read count
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
2.5k
views
Comment:
C: what's meaning of parameter "-t rel_ab_w_read_stats"
4.4 years ago by
dpc
▴ 250
0
votes
0
replies
2.5k
views
Comment:
C: what's meaning of parameter "-t rel_ab_w_read_stats"
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
7.3k
views
Comment:
C: METAPHLAN: Relative abundance to read count
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
7.3k
views
Comment:
C: METAPHLAN: Relative abundance to read count
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
2.5k
views
Comment:
C: what's meaning of parameter "-t rel_ab_w_read_stats"
4.4 years ago by
dpc
▴ 250
0
votes
0
replies
1.5k
views
Comment:
C: Extract out lines with 's__' into a new file together with first two lines of th
4.4 years ago by
dpc
▴ 250
5
votes
14
replies
7.3k
views
METAPHLAN: Relative abundance to read count
metaphlan
phyloseq
updated 4.4 years ago by
antonioggsousa
3.2k • written 4.4 years ago by
dpc
▴ 250
0
votes
1
reply
1.5k
views
Comment:
C: Extract out lines with 's__' into a new file together with first two lines of th
4.4 years ago by
dpc
▴ 250
3
votes
8
replies
1.5k
views
Extract out lines with 's__' into a new file together with first two lines of the file
command
grep
updated 4.4 years ago by
antonioggsousa
3.2k • written 4.4 years ago by
dpc
▴ 250
0
votes
0
replies
747
views
Can I analyse my metagenome profiled data with "Curated Metagenomic Data pipeline"?
metaphlan
curated metagenomic data
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
1.9k
views
Comment:
C: ERROR in QIIME
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
1.9k
views
Comment:
C: ERROR in QIIME
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
2.4k
views
Comment:
C: Smart BLAST or only BLAST?
4.4 years ago by
dpc
▴ 250
0
votes
3
replies
2.4k
views
Smart BLAST or only BLAST?
blast
protein sequence alignment
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
726
views
protein blast from amino acid sequences
BLAST
sequence alignment
phylogenetic analysis
updated 4.4 years ago by
Mensur Dlakic
★ 28k • written 4.4 years ago by
dpc
▴ 250
1
vote
5
replies
1.9k
views
ERROR in QIIME
qiime
biom
merge
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
6.3k
views
Comment:
C: Import metaphlan output to phyloseq
4.4 years ago by
dpc
▴ 250
0
votes
0
replies
12k
views
Comment:
C: Diversity analysis after metaphlan2
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
6.3k
views
Comment:
C: Import metaphlan output to phyloseq
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
6.3k
views
Comment:
C: Import metaphlan output to phyloseq
4.4 years ago by
dpc
▴ 250
0
votes
1
reply
6.3k
views
Comment:
C: Import metaphlan output to phyloseq
4.4 years ago by
dpc
▴ 250
3
votes
13
replies
6.3k
views
Import metaphlan output to phyloseq
metaphlan
phyloseq
wgs
metagenome
updated 4.4 years ago by
Ram
44k • written 4.4 years ago by
dpc
▴ 250
0
votes
1
reply
2.2k
views
Comment:
C: Density vs gene count plot
4.4 years ago by
dpc
▴ 250
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