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0
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Comment: C: Using blastn to find the similarities with short length
8.6 years ago by Rohit ★ 1.5k
0
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1
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4.1k
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Comment: C: BRAKER/GENEMARK ERROR:Can't obtain file lock: Function not implemented
8.6 years ago by Rohit ★ 1.5k
1
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0
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2.5k
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Comment: C: Software For Hiseq/Pacbio Hybrid Assembly In Human Genome
8.7 years ago by Rohit ★ 1.5k
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0
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3.2k
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Comment: C: Platanus error during assembly
8.8 years ago by Rohit ★ 1.5k
0
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1
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2.3k
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Comment: C: RNA-seq de novo transcript assembly from one gene
8.8 years ago by Rohit ★ 1.5k
2
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1
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2.3k
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Answer: A: RNA-seq de novo transcript assembly from one gene
8.8 years ago by Rohit ★ 1.5k
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2.1k
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Comment: C: RNA seq assembly and CEGMA
8.8 years ago by Rohit ★ 1.5k
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0
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2.9k
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Comment: C: De novo genome assembly of haploid genome
8.8 years ago by Rohit ★ 1.5k
0
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1
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3.1k
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Comment: C: Very low aligbnment rate for miRNA
8.8 years ago by Rohit ★ 1.5k
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0
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1.8k
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Comment: C: Strategy for transcriptomic assembly. What do you think is the best way to do it
8.8 years ago by Rohit ★ 1.5k
0
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1
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1.7k
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Comment: C: Methods to identify ORF from de novo assembly
8.8 years ago by Rohit ★ 1.5k
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1
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2.5k
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Answer: A: Keep quality score when correcting with Canu assembler?
8.8 years ago by Rohit ★ 1.5k
4
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1
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2.9k
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Answer: A: De novo genome assembly of haploid genome
8.8 years ago by Rohit ★ 1.5k
0
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0
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3.0k
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Answer: Answer: map methylome data with GKNO mosaik program
updated 3.2 years ago by 44k • written 8.8 years ago by ★ 1.5k
0
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0
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2.4k
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Answer: A: What are the best tools for mapping RNASeq paired-end data (HiSeq2000) for funga
8.8 years ago by Rohit ★ 1.5k
1
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1
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4.6k
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Comment: C: Very low mapping rate of a bam file, reasons?
8.8 years ago by Rohit ★ 1.5k
1
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0
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4.5k
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Comment: C: Help using BUSCO to assess quality of transcriptome
8.8 years ago by Rohit ★ 1.5k
2
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0
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3.9k
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Answer: A: Combined assembly analysis (short reads + long reads)
8.8 years ago by Rohit ★ 1.5k
3
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1
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2.1k
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Answer: A: RNA seq assembly and CEGMA
8.9 years ago by Rohit ★ 1.5k
0
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0
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2.6k
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Answer: A: DBG2OLC - parameter f cannot identify my PacBio reads
8.9 years ago by Rohit ★ 1.5k
0
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0
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1.7k
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Comment: C: vcf to maf conversion
8.9 years ago by Rohit ★ 1.5k
0
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0
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1.6k
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Answer: A: Assembled genome a little larger than Kmergeneie prediction?
8.9 years ago by Rohit ★ 1.5k
0
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1
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2.5k
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Answer: A: how to extract all genes from one chromosome simultaneously?
8.9 years ago by Rohit ★ 1.5k
1
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0
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3.1k
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Comment: C: fungi diploid genome denovo assembly by pacbio reads
8.9 years ago by Rohit ★ 1.5k
5
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0
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4.1k
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Answer: A: High coverage bacterial genome reads causing spurious assemblies
8.9 years ago by Rohit ★ 1.5k
1
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0
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1.7k
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Comment: C: Identify new transcripts using non-sorted bam file?
8.9 years ago by Rohit ★ 1.5k
2
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0
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2.5k
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Comment: C: Can LastZ aligner work with IUPAC ambiguity in Fasta files?
8.9 years ago by Rohit ★ 1.5k
0
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0
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4.6k
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Comment: Comment: Aligning Mb length contigs to a reference genome
updated 2.4 years ago by 44k • written 9.4 years ago by ★ 1.5k
1
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1
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4.6k
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Comment: C: Aligning Mb length contigs to a reference genome
9.6 years ago by Rohit ★ 1.5k
1
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0
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3.0k
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Comment: C: Mapping large contigs to a reference genome
9.6 years ago by Rohit ★ 1.5k
0
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0
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3.7k
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Comment: Comment: PacBio data assembly with Celera
updated 2.2 years ago by 44k • written 9.6 years ago by ★ 1.5k
1
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0
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3.3k
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Comment: C: How do denovo genome/transcriptome assemblers treat ambiguous bases?
9.7 years ago by Rohit ★ 1.5k
0
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0
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6.1k
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Comment: Comment: bedtools getfasta does not give a proper fasta output
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 1.5k
0
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0
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6.1k
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Comment: Comment: bedtools getfasta does not give a proper fasta output
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 1.5k
0
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0
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6.1k
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Comment: C: bedtools getfasta does not give a proper fasta output
9.8 years ago by Rohit ★ 1.5k
0
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0
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8.5k
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Comment: C: Blast Against Sra Dataset
9.8 years ago by Rohit ★ 1.5k
0
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0
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3.5k
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Comment: C: How can we extract the alignment coordinates and gap coordinates in BLAT PSL?
9.9 years ago by Rohit ★ 1.5k
6
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1
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3.3k
views
Answer: Answer: How do denovo genome/transcriptome assemblers treat ambiguous bases?
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 1.5k
8
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4
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3.3k
views
How do denovo genome/transcriptome assemblers treat ambiguous bases?
NGS Transcriptome-assembly Genome-assembly denovo
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 1.5k
3
votes
9
replies
4.5k
views
How Does Merging The Multiple Replicate Data Of A Single Genome Affect The Genome Assembly
genome assembly ngs contigs
updated 10.7 years ago by 20 • written 11.4 years ago by ★ 1.5k
4
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0
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2.7k
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Answer: Answer: De Novo Genome Assembler Preferring Shorter Error-Free Contigs
updated 2.9 years ago by 44k • written 10.9 years ago by ★ 1.5k
0
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0
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4.8k
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Comment: C: Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
11.1 years ago by Rohit ★ 1.5k
0
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2
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4.8k
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Comment: C: Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
11.1 years ago by Rohit ★ 1.5k
2
votes
17
replies
4.8k
views
Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
sam bam alignment samtools
updated 11.1 years ago by 105k • written 11.1 years ago by ★ 1.5k
0
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0
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4.8k
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Comment: C: Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
updated 11.1 years ago by 102k • written 11.1 years ago by ★ 1.5k
0
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2
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4.8k
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Comment: C: Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
11.1 years ago by Rohit ★ 1.5k
0
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1
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4.8k
views
Comment: C: Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
updated 11.1 years ago by 105k • written 11.1 years ago by ★ 1.5k
0
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1
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4.8k
views
Comment: C: Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
11.1 years ago by Rohit ★ 1.5k
0
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0
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11k
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Comment: C: Compare A Denovo Assembly To The Reference Genome
11.2 years ago by Rohit ★ 1.5k
13
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8
replies
11k
views
Compare A Denovo Assembly To The Reference Genome
comparison ngs denovo reference
updated 11.2 years ago by ▴ 40 • written 11.2 years ago by ★ 1.5k
241 results • Page 4 of 5
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