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0
votes
0
replies
196
views
ClusterProfiler GO / KEGG enrichment analysis for non Model organism
KEGG
RNA-SEQ
enrichemnt
9 days ago by
Pegasus
▴ 120
0
votes
0
replies
720
views
Comment:
Comment: What is the best backgrowun gene list to choose for GSEA, ORA, and for KOBAS
5 weeks ago by
Pegasus
▴ 120
0
votes
1
reply
720
views
Comment:
Comment: What is the best backgrowun gene list to choose for GSEA, ORA, and for KOBAS
5 weeks ago by
Pegasus
▴ 120
0
votes
1
reply
720
views
Comment:
Comment: What is the best backgrowun gene list to choose for GSEA, ORA, and for KOBAS
5 weeks ago by
Pegasus
▴ 120
5
votes
6
replies
720
views
What is the best backgrowun gene list to choose for GSEA, ORA, and for KOBAS
RNA-SEQ
5 weeks ago by
Pegasus
▴ 120
2
votes
1
reply
311
views
ROAST
RNA-SEQ
updated 3 months ago by
GenoMax
148k • written 3 months ago by
Pegasus
▴ 120
0
votes
0
replies
216
views
Quorum sensing genes in Bacteria
RNA-SEQ
3 months ago by
Pegasus
▴ 120
0
votes
1
reply
850
views
Comment:
Comment: Low mapping rate using SALMON
4 months ago by
Pegasus
▴ 120
0
votes
2
replies
850
views
Comment:
Comment: Low mapping rate using SALMON
4 months ago by
Pegasus
▴ 120
0
votes
1
reply
850
views
Comment:
Comment: Low mapping rate using SALMON
4 months ago by
Pegasus
▴ 120
0
votes
1
reply
850
views
Comment:
Comment: Low mapping rate using SALMON
4 months ago by
Pegasus
▴ 120
6
votes
10
replies
850
views
Low mapping rate using SALMON
RNA-SEQ
updated 4 months ago by
GenoMax
148k • written 4 months ago by
Pegasus
▴ 120
0
votes
0
replies
780
views
Comment:
Comment: GSEA vs GO-enrichemnt analysis
4 months ago by
Pegasus
▴ 120
2
votes
4
replies
780
views
GSEA vs GO-enrichemnt analysis
RNA-SEQ
4 months ago by
Pegasus
▴ 120
0
votes
1
reply
780
views
Comment:
Comment: GSEA vs GO-enrichemnt analysis
4 months ago by
Pegasus
▴ 120
0
votes
0
replies
687
views
Comment:
Comment: Functional enrichment analysis for unique gene IDs
6 months ago by
Pegasus
▴ 120
0
votes
0
replies
687
views
Comment:
Comment: Functional enrichment analysis for unique gene IDs
7 months ago by
Pegasus
▴ 120
2
votes
4
replies
687
views
Functional enrichment analysis for unique gene IDs
RNA-SEQ
6 months ago by
Pegasus
▴ 120
1
vote
1
reply
327
views
The total expressed genes in RNA-Seq data
RNA-SEQ
updated 7 months ago by
ATpoint
86k • written 7 months ago by
Pegasus
▴ 120
0
votes
2
replies
670
views
Alternative tool or website of PathogenFinder
WGS
bacteria
updated 9 months ago by
GenoMax
148k • written 10 months ago by
Pegasus
▴ 120
0
votes
1
reply
670
views
Answer:
Answer: Alternative tool or website of PathogenFinder
9 months ago by
Pegasus
▴ 120
2
votes
3
replies
846
views
Contigs number vs NNN gap % in WGS
WGS
updated 10 months ago by
GenoMax
148k • written 10 months ago by
Pegasus
▴ 120
0
votes
0
replies
846
views
Comment:
Comment: Contigs number vs NNN gap % in WGS
10 months ago by
Pegasus
▴ 120
0
votes
0
replies
1.0k
views
Comment:
Comment: Finding EntreZ IDs for refseq IDs
10 months ago by
Pegasus
▴ 120
0
votes
1
reply
1.0k
views
Comment:
Comment: Finding EntreZ IDs for refseq IDs
11 months ago by
Pegasus
▴ 120
0
votes
1
reply
1.0k
views
Comment:
Comment: Finding EntreZ IDs for refseq IDs
11 months ago by
Pegasus
▴ 120
6
votes
7
replies
1.0k
views
Finding EntreZ IDs for refseq IDs
RNA-SEQ
10 months ago by
Pegasus
▴ 120
0
votes
0
replies
3.6k
views
Comment:
Comment: What is NCBI Gene ID, where to find it and how to convert to entrez ID?
18 months ago by
Pegasus
▴ 120
0
votes
2
replies
3.6k
views
Comment:
Comment: What is NCBI Gene ID, where to find it and how to convert to entrez ID?
19 months ago by
Pegasus
▴ 120
0
votes
0
replies
897
views
Comment:
Comment: Converting RefSeq protein accession IDs into entreZ IDs
19 months ago by
Pegasus
▴ 120
1
vote
2
replies
897
views
Converting RefSeq protein accession IDs into entreZ IDs
RNA-SEQ
19 months ago by
Pegasus
▴ 120
0
votes
0
replies
1000
views
Comment:
Comment: Find data-based Gene_IDs for unknown gene_IDs in gtf.file
19 months ago by
Pegasus
▴ 120
0
votes
1
reply
1000
views
Comment:
Comment: Find data-based Gene_IDs for unknown gene_IDs in gtf.file
19 months ago by
Pegasus
▴ 120
0
votes
1
reply
1000
views
Comment:
Comment: Find data-based Gene_IDs for unknown gene_IDs in gtf.file
19 months ago by
Pegasus
▴ 120
2
votes
6
replies
1000
views
Find data-based Gene_IDs for unknown gene_IDs in gtf.file
RNA-SEQ
annotation
GO-term
19 months ago by
Pegasus
▴ 120
0
votes
0
replies
864
views
Comment:
Comment: Gene Ontology / Hypothetical proteins
20 months ago by
Pegasus
▴ 120
2
votes
2
replies
864
views
Gene Ontology / Hypothetical proteins
RNA-SEQ
terms
GO
20 months ago by
Pegasus
▴ 120
0
votes
1
reply
1.5k
views
Comment:
Comment: GFF/GTF file error / featureCounts
20 months ago by
Pegasus
▴ 120
0
votes
1
reply
1.5k
views
Comment:
Comment: GFF/GTF file error / featureCounts
20 months ago by
Pegasus
▴ 120
1
vote
5
replies
1.5k
views
GFF/GTF file error / featureCounts
RNA-SEQ
updated 20 months ago by
barslmn
★ 2.3k • written 20 months ago by
Pegasus
▴ 120
0
votes
0
replies
1.2k
views
Comment:
Comment: FeatureCounts >edgeR > GO
21 months ago by
Pegasus
▴ 120
0
votes
0
replies
468
views
Link products to their genes
RNA-SEQ
GO
edgeR
21 months ago by
Pegasus
▴ 120
0
votes
1
reply
1.1k
views
Comment:
Comment: How to extract/find the actual names of the gene_IDs if they are not fully prese
21 months ago by
Pegasus
▴ 120
1
vote
3
replies
1.1k
views
How to extract/find the actual names of the gene_IDs if they are not fully presented in gtf.file, and link them to the Count.matrix
featureCounts
gtf
RNA-Seq
updated 21 months ago by
GenoMax
148k • written 21 months ago by
Pegasus
▴ 120
0
votes
1
reply
1.2k
views
Comment:
Comment: FeatureCounts >edgeR > GO
21 months ago by
Pegasus
▴ 120
2
votes
4
replies
1.2k
views
FeatureCounts >edgeR > GO
RNA-SEQ
21 months ago by
Pegasus
▴ 120
0
votes
0
replies
946
views
Comment:
Comment: RNA-seq data analysis (prokaryotes) featurecounts with
21 months ago by
Pegasus
▴ 120
1
vote
2
replies
946
views
RNA-seq data analysis (prokaryotes) featurecounts with
featureCounts
RNA-Seq
21 months ago by
Pegasus
▴ 120
0
votes
0
replies
1.4k
views
Comment:
Comment: Trimmomatic generated two (reverse-forward) paired-files with different number o
21 months ago by
Pegasus
▴ 120
0
votes
1
reply
1.4k
views
Comment:
Comment: Trimmomatic generated two (reverse-forward) paired-files with different number o
21 months ago by
Pegasus
▴ 120
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