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3
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3.7k
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Answer: A: Bioinformatics freelancers needed
8.6 years ago by biocyberman ▴ 870
0
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0
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2.0k
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download/cache ensembl biomaRt data for genes and their annotations?
ensembl biomaRt
8.6 years ago by biocyberman ▴ 870
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0
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2.4k
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Comment: C: Cant find Clustalw.exe through Bioperl
8.7 years ago by biocyberman ▴ 870
0
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1
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2.4k
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Answer: A: Cant find Clustalw.exe through Bioperl
8.7 years ago by biocyberman ▴ 870
0
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0
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8.1k
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Comment: C: macs2 bdgdiff calculation without genomic background control?
8.7 years ago by biocyberman ▴ 870
1
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1
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4.4k
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Comment: C: Retrieve GO terms ontology
8.7 years ago by biocyberman ▴ 870
1
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0
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4.4k
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Comment: C: Retrieve GO terms ontology
8.7 years ago by biocyberman ▴ 870
2
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1
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4.4k
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Answer: A: Retrieve GO terms ontology
8.7 years ago by biocyberman ▴ 870
0
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1
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1.8k
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Answer: A: Analysis ideas for a list of DEG with a lot of unannotated regions?
8.7 years ago by biocyberman ▴ 870
2
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0
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3.0k
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Answer: A: How to plot a histogram for billions of genotype quality values?
8.7 years ago by biocyberman ▴ 870
0
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0
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3.6k
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Comment: C: How to convert genomic position to transcript position?
8.7 years ago by biocyberman ▴ 870
1
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1
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8.1k
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Comment: C: macs2 bdgdiff calculation without genomic background control?
8.7 years ago by biocyberman ▴ 870
11
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4
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12k
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Answer: A: Where can I get ?or how can I make a mappability track for hg38 assembly
8.7 years ago by biocyberman ▴ 870
2
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0
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2.5k
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Answer: A: C++ tools are hard to install for biologist, why the community stick on it?
8.7 years ago by biocyberman ▴ 870
0
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1
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68k
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Comment: C: How To Convert Gencode Gtf Into Bed Format ?
8.7 years ago by biocyberman ▴ 870
0
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1
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2.2k
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Comment: C: Find 'true' gene for a pseudogene?
8.7 years ago by biocyberman ▴ 870
1
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3
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2.2k
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Find 'true' gene for a pseudogene?
ensembl biomart
updated 8.7 years ago by 27k • written 8.7 years ago by ▴ 870
4
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2
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3.9k
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'effective genome size' , how precisse does it have to be?
macs2
updated 8.8 years ago by 101k • written 8.8 years ago by ▴ 870
0
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3
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2.0k
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GO annotation for genes unkown by Panther and Reactome
Gene-ontology
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 870
0
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1
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3.6k
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Comment: C: Fasta header unique sequence
8.9 years ago by biocyberman ▴ 870
0
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0
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17k
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Comment: C: Please help with removing spaces from fasta file
8.9 years ago by biocyberman ▴ 870
0
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1
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6.2k
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Answer: A: Building Bowtie index failure
8.9 years ago by biocyberman ▴ 870
0
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0
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3.6k
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Comment: C: Fasta header unique sequence
8.9 years ago by biocyberman ▴ 870
0
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0
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1.9k
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Comment: C: batch blast programme
updated 8.9 years ago by 44k • written 8.9 years ago by ▴ 870
0
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0
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3.5k
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Comment: C: Whole genome coordinates of promoters/gene regulatory elements
8.9 years ago by biocyberman ▴ 870
0
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0
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3.5k
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Comment: C: Whole genome coordinates of promoters/gene regulatory elements
8.9 years ago by biocyberman ▴ 870
4
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0
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5.0k
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Answer: Answer: Tool for reducing contigs
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 870
0
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0
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1.8k
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Comment: C: Retrieving files from Interpro
9.1 years ago by biocyberman ▴ 870
0
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0
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11k
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Comment: C: How to create a Blast database of viruses ?
9.1 years ago by biocyberman ▴ 870
7
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6
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3.4k
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Programatically fetch all GI numbers for nucleotide sequences of a species from NCBI?
ncbi blast biopython edirect
updated 9.1 years ago by 11k • written 9.1 years ago by ▴ 870
1
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0
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3.4k
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Comment: C: Programatically fetch all GI numbers for nucleotide sequences of a species from
9.1 years ago by biocyberman ▴ 870
0
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0
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5.4k
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Comment: Comment: BedTools intersect - Segmentation fault
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 870
0
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1
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2.6k
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Answer: Answer: Gen file id reordering
updated 23 months ago by 44k • written 9.4 years ago by ▴ 870
0
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0
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4.0k
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Comment: C: Alternatives to LifeScope for realigning SOLiD BAM files
9.5 years ago by biocyberman ▴ 870
0
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0
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27k
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Comment: Comment: How to determine reference genome that was used for alignment given BAM with obs
updated 23 months ago by 44k • written 9.5 years ago by ▴ 870
5
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0
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27k
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Answer: Answer: How to determine reference genome that was used for alignment given BAM with obs
updated 23 months ago by 44k • written 9.5 years ago by ▴ 870
1
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4
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3.7k
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Tophat failed at 'Mapping left_kept_reads to transcriptome'
tophat RNA-Seq
updated 23 months ago by 44k • written 9.5 years ago by ▴ 870
0
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1
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3.7k
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Comment: Comment: Tophat failed at 'Mapping left_kept_reads to transcriptome'
updated 2.5 years ago by 44k • written 9.5 years ago by ▴ 870
12
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5
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3.0k
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Why a de novo assembler is not a transcript assembler?
RNA-Seq Assembly
updated 23 months ago by 44k • written 9.5 years ago by ▴ 870
0
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1
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3.0k
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Comment: Comment: Why a de novo assembler is not a transcript assembler?
updated 23 months ago by 44k • written 9.5 years ago by ▴ 870
0
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0
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6.5k
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Comment: C: Making FASTA files
9.5 years ago by biocyberman ▴ 870
3
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1
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4.8k
views
Answer: Answer: How to get protein names, gene symbols, refseq numbers, gi numbers... using UCSC
updated 23 months ago by 44k • written 9.5 years ago by ▴ 870
1
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4
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2.7k
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BED file: how to split/join into fragments of fixed length that take only portions INSIDE the intervals ?
BED bedops bedtools
updated 2.0 years ago by 44k • written 9.5 years ago by ▴ 870
0
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0
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2.7k
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Comment: Comment: BED file: how to split/join into fragments of fixed length that take only portio
updated 2.0 years ago by 44k • written 9.5 years ago by ▴ 870
0
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1
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2.7k
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Comment: Comment: BED file: how to split/join into fragments of fixed length that take only portio
updated 2.0 years ago by 44k • written 9.5 years ago by ▴ 870
0
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0
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2.4k
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Comment: C: convert pseudogene IDs in Gencode releases to HGNC gene symbols
9.5 years ago by biocyberman ▴ 870
1
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2
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2.4k
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convert pseudogene IDs in Gencode releases to HGNC gene symbols
pseudogene gene genecode
updated 2.9 years ago by 44k • written 9.5 years ago by ▴ 870
3
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1
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4.7k
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Answer: A: filter several VCF files for fixed SNP
9.5 years ago by biocyberman ▴ 870
0
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0
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5.6k
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Answer: Answer: Retrieving CDS sequences NCBI
updated 22 months ago by 44k • written 9.5 years ago by ▴ 870
0
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0
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2.6k
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Comment: Comment: ensembl biomart: why some genes are not found?
updated 22 months ago by 44k • written 9.5 years ago by ▴ 870
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