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Answer: Answer: Splitting multifasta by string match
2.5 years ago by rpolicastro 13k
2
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2.8k
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Answer: Answer: Plot multiple genes from dds data
2.5 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: Error finding variable features in Seurat
2.5 years ago by rpolicastro 13k
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2.4k
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Comment: Comment: Create singlecellexperiment object with colData
2.5 years ago by rpolicastro 13k
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3.3k
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Comment: Comment: Batch correction for RNA-seq didn't work with ComBat-seq tool
2.5 years ago by rpolicastro 13k
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2.5k
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Comment: Comment: how to fetch intron coordinates from transcriptome.gtf file ? is there any dir
2.5 years ago by rpolicastro 13k
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1.0k
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Comment: Comment: PCA plot interpretation after accounting for batch effects with SVA
2.5 years ago by rpolicastro 13k
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2
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3.0k
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Answer: Answer: Rna Seq Analysis Script
2.5 years ago by rpolicastro 13k
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956
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Answer: Answer: How to provide read1 and read2 fastq files from two lanes to kallisto | bustools
2.5 years ago by rpolicastro 13k
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1.8k
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Comment: Comment: DTU vs DTE and method to these analysis
2.5 years ago by rpolicastro 13k
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1.6k
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Comment: Comment: Strand in gff file
2.5 years ago by rpolicastro 13k
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1.5k
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Comment: Comment: Making heatmap for pseudotime with clusters annotation
2.5 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: GSEA not returning significant gene sets
2.5 years ago by rpolicastro 13k
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1.5k
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Comment: Comment: How to create kallisto index that does not include ribosomal genes
2.5 years ago by rpolicastro 13k
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838
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Comment: Comment: Can I compare different RNAseq experiment DEG lists to see which experiments are
2.5 years ago by rpolicastro 13k
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838
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Comment: Comment: Can I compare different RNAseq experiment DEG lists to see which experiments are
2.5 years ago by rpolicastro 13k
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1.7k
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Comment: Comment: Should I wait for finishing the BWA MEM alignment?
2.5 years ago by rpolicastro 13k
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929
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Comment: Comment: Seurat cell cycle (single cell analysis)
2.5 years ago by rpolicastro 13k
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1.0k
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Comment: Comment: How to replace exactly 100 Ns
2.5 years ago by rpolicastro 13k
3
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1.0k
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Answer: Answer: How to replace exactly 100 Ns
2.5 years ago by rpolicastro 13k
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0
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1.2k
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Comment: Comment: Difference
2.5 years ago by rpolicastro 13k
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0
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2.5k
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Answer: Answer: Editing FASTQ headers
2.5 years ago by rpolicastro 13k
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1
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1.2k
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Comment: Comment: Interpret stacked violin plots
2.5 years ago by rpolicastro 13k
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1.1k
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Comment: Comment: Problem with BWA MEM
2.5 years ago by rpolicastro 13k
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1.3k
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Comment: Comment: Strandedness of RNA-seq results
2.5 years ago by rpolicastro 13k
2
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2
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3.4k
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Answer: Answer: Which pipeline to choose for RNA velocity
2.5 years ago by rpolicastro 13k
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0
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1.3k
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Answer: Answer: Determine sex/ gender of a mouse cell line via sequencing data
2.5 years ago by rpolicastro 13k
2
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0
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2.0k
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Answer: Answer: For loop in R
2.5 years ago by rpolicastro 13k
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0
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680
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Answer: Answer: GSEA result interpretation
2.6 years ago by rpolicastro 13k
3
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1
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1.6k
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Answer: Answer: STAR align quantMode
2.6 years ago by rpolicastro 13k
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1
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3.7k
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Comment: Comment: LRT test with DESeq2 and how to interpret the results
2.6 years ago by rpolicastro 13k
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2
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1.4k
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Comment: Comment: What is cut-off for significance in DE analysis in sc-RNA seq data
2.6 years ago by rpolicastro 13k
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1
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1.1k
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Comment: Comment: When identifying DEGs, should all the libraries be normalized together?
2.6 years ago by rpolicastro 13k
6
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1
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5.5k
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Answer: Answer: Problems installing cutadapt with conda
2.6 years ago by rpolicastro 13k
0
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1
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5.5k
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Comment: Comment: Problems installing cutadapt with conda
2.6 years ago by rpolicastro 13k
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0
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2.8k
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Comment: Comment: Extract transcript fasta sequences using gtf
2.6 years ago by rpolicastro 13k
1
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1
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1.1k
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Answer: Answer: GRanges R
2.6 years ago by rpolicastro 13k
1
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1
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3.7k
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Comment: Comment: LRT test with DESeq2 and how to interpret the results
2.6 years ago by rpolicastro 13k
1
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2
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3.7k
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Comment: Comment: LRT test with DESeq2 and how to interpret the results
2.6 years ago by rpolicastro 13k
0
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1
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1.1k
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Comment: Comment: DESeq2 - Fewer DE genes with increasing sample size
2.6 years ago by rpolicastro 13k
2
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0
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2.0k
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Comment: Comment: BWA-MEM2 and samtools using for loop
2.6 years ago by rpolicastro 13k
1
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2
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2.8k
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Comment: Comment: Extract transcript fasta sequences using gtf
2.6 years ago by rpolicastro 13k
1
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1
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1.1k
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Comment: Comment: Quantification of abundance of one gene splicing isoform
2.6 years ago by rpolicastro 13k
2
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1
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1.1k
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Answer: Answer: Quantification of abundance of one gene splicing isoform
2.6 years ago by rpolicastro 13k
4
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0
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681
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Answer: Answer: find function with samtools - convert format to all subfolders
2.6 years ago by rpolicastro 13k
0
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1
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700
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Comment: Comment: Normalization of Counts Matrix
2.6 years ago by rpolicastro 13k
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0
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934
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Comment: Comment: clusterprofiler gsea analysis
2.6 years ago by rpolicastro 13k
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1
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748
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Comment: Comment: Problem in getting SNAI1 gene in prostate DEG table
2.6 years ago by rpolicastro 13k
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0
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549
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Answer: Answer: Which DeSeq2 study design to use when there is data from controls and two differ
2.6 years ago by rpolicastro 13k
0
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0
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948
views
Comment: Comment: How to delete letter "X" from numerical values in ggplot x-axis
2.6 years ago by rpolicastro 13k
1,382 results • Page 10 of 28
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