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Answer: Answer: how can I turn a skinny/long data frame into a Seurat object
3.5 years ago by rpolicastro 13k
3
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813
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Answer: Answer: how to use directories as index of a vector in R
3.5 years ago by rpolicastro 13k
0
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1.3k
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Comment: Comment: Integrating two Seurat multimodal objects
3.5 years ago by rpolicastro 13k
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Comment: Comment: TPM to differential expression
3.5 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: T-test analysis for gene expression comparison
3.5 years ago by rpolicastro 13k
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1.4k
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Comment: Comment: is it normal to have zero mitochondria genes counts in my 10X data which is from
3.6 years ago by rpolicastro 13k
0
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1
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1.4k
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Comment: Comment: is it normal to have zero mitochondria genes counts in my 10X data which is from
3.6 years ago by rpolicastro 13k
1
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1
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4.2k
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Comment: Comment: How to get output of annotated genes from ChIPseeker tool
3.6 years ago by rpolicastro 13k
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2
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1.3k
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Comment: Comment: Cell composition in each condition of single cell data
3.6 years ago by rpolicastro 13k
3
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1
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4.7k
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Answer: Answer: How to install PEER in R?
3.7 years ago by rpolicastro 13k
2
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1
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1.1k
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Answer: Answer: filtering a dataframe of DE GO terms with a dataframe containing GO terms of int
3.7 years ago by rpolicastro 13k
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1.0k
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Comment: Comment: Appropriate Trimming Parameter
3.7 years ago by rpolicastro 13k
0
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1.2k
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Answer: Answer: Replace Drugbank IDs with Drug name [R]
3.7 years ago by rpolicastro 13k
0
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0
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802
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Answer: Answer: Can the odds ratio change based on a multiple logistic regression model?
3.7 years ago by rpolicastro 13k
0
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1
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3.8k
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Comment: Comment: Bash loop for bbduk
3.7 years ago by rpolicastro 13k
0
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0
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1.3k
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Comment: Comment: How to convert an RDS file containing annotated cells to a loom file
3.7 years ago by rpolicastro 13k
0
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1
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2.2k
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Comment: Comment: How to add space in specific location in a barplot using ggplot2
3.7 years ago by rpolicastro 13k
2
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1
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1.0k
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Answer: Answer: How to get started with transcriptome sequencing as a bioinformatics beginner.
3.7 years ago by rpolicastro 13k
0
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1
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840
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Comment: Comment: Power analysis to determine sample size for a single-cell sequencing study
3.7 years ago by rpolicastro 13k
0
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2.4k
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Comment: Comment: RNA velocyto scRNA-seq install
3.7 years ago by rpolicastro 13k
1
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2.4k
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Answer: Answer: RNA velocyto scRNA-seq install
3.7 years ago by rpolicastro 13k
1
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1
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2.2k
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Comment: Comment: normalize different size fastq files
3.7 years ago by rpolicastro 13k
4
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1
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3.6k
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Answer: Answer: RSEM gene-level estimates to DESeq2
3.7 years ago by rpolicastro 13k
3
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3.0k
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Answer: Answer: NovaSeq Duplicates
3.7 years ago by rpolicastro 13k
2
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1
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915
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Answer: Answer: Adding mean and error onto scatterplot data
3.7 years ago by rpolicastro 13k
0
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1.1k
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Comment: Comment: Score from correlations per genes in DGE results
3.7 years ago by rpolicastro 13k
8
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0
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3.1k
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Tutorial: Pipes in R: An introduction and some advanced tips and tricks.
R
3.7 years ago by rpolicastro 13k
3
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1
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1.1k
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Answer: Answer: Score from correlations per genes in DGE results
3.7 years ago by rpolicastro 13k
0
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0
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2.3k
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Comment: Comment: Important genes are not differentially expressed
3.7 years ago by rpolicastro 13k
1
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1
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4.8k
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Comment: Comment: Converting merged Seurat object back to dgCMatrix
3.7 years ago by rpolicastro 13k
3
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1
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4.0k
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Answer: Answer: Understanding Seurat Object
3.7 years ago by rpolicastro 13k
1
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0
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13k
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Comment: Comment: correct way of analyzing cell proportions in singlecell data
3.7 years ago by rpolicastro 13k
6
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0
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2.9k
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Tutorial: data.frames in R: How vectorization can save you time and heartache
R
3.7 years ago by rpolicastro 13k
0
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0
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1.1k
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Comment: Comment: Can I control the exposure time as a batch effect?
3.7 years ago by rpolicastro 13k
0
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1
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1.9k
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Comment: Comment: Error in apply(counts, 2, function(x) rpkm(x, lengths)) : dim(X) must have a pos
3.7 years ago by rpolicastro 13k
1
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0
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2.3k
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Answer: Answer: hypergeometric test for under-representation/over-representation of cells in a c
3.7 years ago by rpolicastro 13k
4
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2
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940
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Comment: Comment: Heirarchal regression for model comparison, RNA-seq
3.7 years ago by rpolicastro 13k
0
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1
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1.7k
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Comment: Comment: Create a seurat object from a DESeqDataSet
3.7 years ago by rpolicastro 13k
0
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1
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1.5k
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Comment: Comment: How do I filter interactions that are more than 100kb and less than 3kb
3.7 years ago by rpolicastro 13k
0
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2
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1.5k
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Comment: Comment: How do I filter interactions that are more than 100kb and less than 3kb
3.7 years ago by rpolicastro 13k
0
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1
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1.5k
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Comment: Comment: How do I filter interactions that are more than 100kb and less than 3kb
3.7 years ago by rpolicastro 13k
0
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1
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2.5k
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Comment: Comment: MACS: peak calling from snATAC data
3.7 years ago by rpolicastro 13k
0
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1
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2.5k
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Comment: Comment: MACS: peak calling from snATAC data
3.7 years ago by rpolicastro 13k
0
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1
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2.5k
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Comment: Comment: MACS: peak calling from snATAC data
3.7 years ago by rpolicastro 13k
0
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1
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2.5k
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Comment: Comment: MACS: peak calling from snATAC data
3.7 years ago by rpolicastro 13k
1
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0
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2.5k
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Comment: Comment: UMAP of 10X and SmartSeq2 datasets on same plot
3.7 years ago by rpolicastro 13k
0
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0
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3.4k
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Comment: Comment: I am not able to let R read my file
3.7 years ago by rpolicastro 13k
0
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0
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3.4k
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Comment: Comment: I am not able to let R read my file
3.7 years ago by rpolicastro 13k
0
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0
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3.4k
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Comment: Comment: I am not able to let R read my file
3.7 years ago by rpolicastro 13k
3
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0
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91k
views
Comment: C: Installing an updated R version (>=4.0) using conda
3.7 years ago by rpolicastro 13k
1,382 results • Page 16 of 28
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