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1
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2
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2.0k
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Answer: C: Sequencing lane and introduction of batch variation
4.0 years ago by rpolicastro 13k
1
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1
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2.7k
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Answer: A: How to extract sequences from multiple fastq files based on part of the header?
4.0 years ago by rpolicastro 13k
1
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1
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1.0k
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Comment: C: How to interpret one region of gene with much higher RNASeq coverage than other
4.0 years ago by rpolicastro 13k
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1
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2.3k
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Comment: C: Remove Chr:position format to just Chr
4.0 years ago by rpolicastro 13k
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1.2k
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Comment: C: The maximum number of peaks in a ChIP-seq data (bigWig format)
4.0 years ago by rpolicastro 13k
6
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1
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5.3k
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Answer: A: Remove uncharacterized chromosomes from reference fasta file
4.0 years ago by rpolicastro 13k
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1
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966
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Comment: C: GO Terms - most common between - many gene lists (from 36 scRNAseq clusters)
4.0 years ago by rpolicastro 13k
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1
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1.7k
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Answer: C: Combine a sample that is run in two lanes by the Seurat objects
4.0 years ago by rpolicastro 13k
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850
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Comment: C: Annotation with KEGGrest
4.0 years ago by rpolicastro 13k
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3.6k
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Comment: C: Converting an Rdata set to an excel sheet
4.0 years ago by rpolicastro 13k
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1.2k
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Comment: C: The maximum number of peaks in a ChIP-seq data (bigWig format)
4.0 years ago by rpolicastro 13k
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1
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1.6k
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Comment: C: read10X ERROR Seurat
4.0 years ago by rpolicastro 13k
1
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458
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Answer: C: some question about the NGS sequence
4.0 years ago by rpolicastro 13k
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1.1k
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Comment: C: Why I can't download gtf files from GenCode
4.0 years ago by rpolicastro 13k
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0
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1.2k
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Comment: C: How do I remove Batch Effects from Two Separate raw RNA SEQ datasets
4.0 years ago by rpolicastro 13k
3
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1
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1.2k
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Answer: C: How do I remove Batch Effects from Two Separate raw RNA SEQ datasets
4.0 years ago by rpolicastro 13k
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1
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1.0k
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Comment: C: Alignment: how to deal with read mapped on decoy
4.0 years ago by rpolicastro 13k
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1
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1.2k
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Comment: C: The maximum number of peaks in a ChIP-seq data (bigWig format)
4.0 years ago by rpolicastro 13k
0
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1
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1.2k
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Comment: C: The maximum number of peaks in a ChIP-seq data (bigWig format)
4.0 years ago by rpolicastro 13k
0
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1
reply
1.2k
views
Comment: C: The maximum number of peaks in a ChIP-seq data (bigWig format)
4.0 years ago by rpolicastro 13k
2
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1
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2.4k
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Answer: C: choose specific python version within conda environment
4.0 years ago by rpolicastro 13k
0
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0
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629
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Comment: C: Regression - correcting for the same covariate with a different value twice
4.0 years ago by rpolicastro 13k
2
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1
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1.2k
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Comment: C: scRNA analysis in PDX model
4.0 years ago by rpolicastro 13k
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0
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701
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Comment: C: KEGG enrichment pathway
4.0 years ago by rpolicastro 13k
1
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1
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6.0k
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Answer: A: Gene expression heatmap following pseudotime analysis
4.0 years ago by rpolicastro 13k
1
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6.0k
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Comment: C: Gene expression heatmap following pseudotime analysis
4.0 years ago by rpolicastro 13k
3
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1.7k
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Answer: A: Error on Linear regression bulkRNAseq
4.0 years ago by rpolicastro 13k
0
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0
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1.2k
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Answer: C: Confusion of the input format for DESeq2 and EdgeR for bulk- and scRNA-seq
4.0 years ago by rpolicastro 13k
0
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1
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1.9k
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Comment: C: Creating Correlation Plot using distance method from a data.frame
4.0 years ago by rpolicastro 13k
0
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1
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6.0k
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Comment: C: Gene expression heatmap following pseudotime analysis
4.0 years ago by rpolicastro 13k
1
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1
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710
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Answer: C: question regarding QC of scRNA-seq data
4.0 years ago by rpolicastro 13k
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1
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2.7k
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Comment: C: Barplot: error Warning message: Removed rows containing missing values (geom_ba
4.0 years ago by rpolicastro 13k
0
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1
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886
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Comment: C: Chip_seq analysis remove duplicates
4.0 years ago by rpolicastro 13k
0
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0
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620
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Comment: C: Bubble Plot of two different GO
4.0 years ago by rpolicastro 13k
0
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1
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563
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Comment: C: Selecting Samples based on Clustering
4.0 years ago by rpolicastro 13k
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0
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1.3k
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Comment: C: Two Sample t-test with bootstrapping for gene expression matrix in R
4.0 years ago by rpolicastro 13k
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1
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1.3k
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Comment: C: bigWig tracks inconsistent with MACS2 callpeak
4.0 years ago by rpolicastro 13k
1
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1
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6.5k
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Comment: C: How to get real cell names from Seurat Object?
4.0 years ago by rpolicastro 13k
0
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0
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1.9k
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Comment: C: How can I run "gene set enrichment" (not necessarily GSEA) with only one conditi
4.0 years ago by rpolicastro 13k
0
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1
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1.9k
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Answer: C: How can I run "gene set enrichment" (not necessarily GSEA) with only one conditi
4.0 years ago by rpolicastro 13k
0
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1
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6.6k
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Comment: C: regressing out covariate from Seurat integrated data
4.0 years ago by rpolicastro 13k
0
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1
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6.6k
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Comment: C: regressing out covariate from Seurat integrated data
4.0 years ago by rpolicastro 13k
0
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0
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1.4k
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Comment: C: Exprimental design for DESeq2 or edger
4.0 years ago by rpolicastro 13k
0
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0
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825
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Comment: C: Question: should we integrate samples from different study groups?
4.0 years ago by rpolicastro 13k
0
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2
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825
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Answer: A: Question: should we integrate samples from different study groups?
4.0 years ago by rpolicastro 13k
1
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2
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1.4k
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Comment: C: bowtie2 mapping oritation problem
4.0 years ago by rpolicastro 13k
1
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1
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2.2k
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Comment: C: Mapping rate troubles
4.0 years ago by rpolicastro 13k
2
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1
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7.6k
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Answer: C: Seurat: Assay to use for differential expression in an integrated data
4.0 years ago by rpolicastro 13k
1
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1
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8.9k
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Comment: C: Running featureCounts separately for each sample and merging results
4.0 years ago by rpolicastro 13k
1
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1
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2.2k
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Comment: C: Mapping rate troubles
4.0 years ago by rpolicastro 13k
1,382 results • Page 18 of 28
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