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Comment: Comment: Deseq2/ComplexHeatmap - is it possible to combine 4 heatmaps together?
19 months ago by rpolicastro 13k
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1.0k
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Comment: Comment: normalize coordinates to the same length
19 months ago by rpolicastro 13k
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1.0k
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Comment: Comment: normalize coordinates to the same length
19 months ago by rpolicastro 13k
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1.5k
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Answer: Answer: remove batch effect
20 months ago by rpolicastro 13k
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1.2k
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Comment: Comment: Is it possible to draw volcano plot without p values
20 months ago by rpolicastro 13k
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Comment: Comment: Seqtk
20 months ago by rpolicastro 13k
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655
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Comment: Comment: Getting chromosome of unusual chromosome names e.g. 'CHR_HSCHR8_8_CTG1'
20 months ago by rpolicastro 13k
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523
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Comment: Comment: Regression factor levels question
20 months ago by rpolicastro 13k
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523
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Comment: Comment: Regression factor levels question
20 months ago by rpolicastro 13k
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952
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Comment: Comment: R package for functional enrichment and depletion analysis
20 months ago by rpolicastro 13k
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836
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Answer: Answer: Transmictomic analysis with draft reference genome
20 months ago by rpolicastro 13k
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836
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Comment: Comment: Transmictomic analysis with draft reference genome
20 months ago by rpolicastro 13k
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5.2k
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Answer: Answer: Creating binary matrix of absence/presence of genes in multiple column lists
20 months ago by rpolicastro 13k
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1.2k
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Answer: Answer: how to rename or time bunch of file names in fasta file
20 months ago by rpolicastro 13k
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759
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Answer: Answer: My keys are all ENSEMBL, but R says they are not valid keys for ENSEMBL
20 months ago by rpolicastro 13k
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952
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Answer: Answer: R package for functional enrichment and depletion analysis
20 months ago by rpolicastro 13k
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735
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Comment: Comment: Suggestion for approaching multiple conditions scRNA-seq
20 months ago by rpolicastro 13k
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590
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Comment: Comment: how to import hdf5 Hi-C data into R using HiTC package
20 months ago by rpolicastro 13k
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1.2k
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Comment: Comment: Plot heatmap using row_splitting but splitting should based on a column in data
20 months ago by rpolicastro 13k
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1
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1.2k
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Comment: Comment: Plot heatmap using row_splitting but splitting should based on a column in data
20 months ago by rpolicastro 13k
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1
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1.8k
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Comment: Comment: Bad quality fastq files for analysis
20 months ago by rpolicastro 13k
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535
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Comment: Comment: Combining RNAseq datasets
20 months ago by rpolicastro 13k
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1.2k
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Comment: Comment: Languages for Bioinformatics
20 months ago by rpolicastro 13k
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694
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Comment: Comment: A way to find which genome builds a package supports
20 months ago by rpolicastro 13k
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681
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Comment: Comment: calculating down-regulated and upregulated genes from a set of values
20 months ago by rpolicastro 13k
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681
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Comment: Comment: calculating down-regulated and upregulated genes from a set of values
20 months ago by rpolicastro 13k
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1
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1.1k
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Comment: Comment: Between sample normalization with replicates
20 months ago by rpolicastro 13k
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1
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701
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Comment: Comment: Integrating single-nucleus RNA-seq and single-cell RNA-seq datasets
20 months ago by rpolicastro 13k
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1.2k
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Comment: Comment: How to make line graph with circles in R
20 months ago by rpolicastro 13k
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2.1k
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Comment: Comment: How to convert hard-masked genome to soft-masked?
20 months ago by rpolicastro 13k
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1
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2.1k
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Answer: Answer: How to convert hard-masked genome to soft-masked?
20 months ago by rpolicastro 13k
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816
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Comment: Comment: Aggregating multiple 10 X samples count matrices into one before analysis.
20 months ago by rpolicastro 13k
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2.1k
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Comment: Comment: WGCNA number of modules issue
21 months ago by rpolicastro 13k
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1.4k
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Comment: Comment: WGCNA goodGenes message error
21 months ago by rpolicastro 13k
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1.7k
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Comment: Comment: General approach for unsupervised clustering of bulk RNAseq samples and deriving
21 months ago by rpolicastro 13k
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862
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Comment: Comment: Size of two scRNA-Seq conditions
21 months ago by rpolicastro 13k
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862
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Comment: Comment: Size of two scRNA-Seq conditions
21 months ago by rpolicastro 13k
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1.5k
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Comment: Comment: WGCNA gene selection: gene significance or LASSO?
22 months ago by rpolicastro 13k
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665
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Comment: Comment: Single-cell RNA seq for bovine
22 months ago by rpolicastro 13k
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617
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Answer: Answer: How to swap fasta entrys in a fasta file?
22 months ago by rpolicastro 13k
1
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1.2k
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Comment: Comment: min.cells in CreateSeuratObject
22 months ago by rpolicastro 13k
2
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1
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705
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Answer: Answer: Create single cell reference for MuSIC
22 months ago by rpolicastro 13k
2
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1
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1.4k
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Answer: Answer: How to perform scRNA seq analysis?
23 months ago by rpolicastro 13k
2
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1.6k
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Comment: Comment: Make large matrix data interpretable. How?
23 months ago by rpolicastro 13k
3
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1.1k
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Comment: Comment: how to loop through various dataframes in R
23 months ago by rpolicastro 13k
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603
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Comment: Comment: Differentiate samples in linear regression
23 months ago by rpolicastro 13k
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663
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Comment: Comment: Is it possible to create gene enrichment plot for wild type (only one type of sa
23 months ago by rpolicastro 13k
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2
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1.2k
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Comment: Comment: Filter only overlapping portion of read pairs?
23 months ago by rpolicastro 13k
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2.5k
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Comment: Comment: find the mate of a read using pysam
23 months ago by rpolicastro 13k
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762
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Job: Senior Research Associate/Scientist, Computational Biology
computational-biologist
updated 17 months ago by 44k • written 23 months ago by 13k
1,382 results • Page 5 of 28
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