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Comment: Comment: batch correction of single cell dataset
2.3 years ago by rpolicastro 13k
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718
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Comment: Comment: substract granges and keep extra columns
2.3 years ago by rpolicastro 13k
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604
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Comment: Comment: STAR problem
2.3 years ago by rpolicastro 13k
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2.2k
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Comment: Comment: convert bedgraph to Granges object
updated 2.3 years ago by 44k • written 2.3 years ago by 13k
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1
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2.2k
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Comment: Comment: convert bedgraph to Granges object
updated 2.3 years ago by 44k • written 2.3 years ago by 13k
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2.2k
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Answer: Answer: convert bedgraph to Granges object
2.3 years ago by rpolicastro 13k
3
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1.5k
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Answer: Answer: Changing the x-axis in ggseqlogo in R
2.3 years ago by rpolicastro 13k
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1
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3.3k
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Comment: Comment: The best way to get gene lengths for 15K+ genes?
2.3 years ago by rpolicastro 13k
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2.4k
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Comment: Comment: Why do I have sequential 100 G (GGGGGGGGGG...) in R2 FastQC report?
2.3 years ago by rpolicastro 13k
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1.0k
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Answer: Answer: transcription binding site prediction from fasta sequence
2.3 years ago by rpolicastro 13k
4
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1
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2.4k
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Answer: Answer: Why do I have sequential 100 G (GGGGGGGGGG...) in R2 FastQC report?
2.3 years ago by rpolicastro 13k
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1
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1.1k
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Comment: Comment: Using getFrag to extract sequence fragments
2.3 years ago by rpolicastro 13k
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1
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1.1k
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Comment: Comment: Using getFrag to extract sequence fragments
2.3 years ago by rpolicastro 13k
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4.5k
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Answer: Answer: Extracting fasta sequence in R
2.3 years ago by rpolicastro 13k
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0
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5.1k
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Comment: Comment: Transform a data.frame to GRranges in R
2.3 years ago by rpolicastro 13k
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1
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1.6k
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Comment: Comment: Error in GCT file to perform GSEA
2.3 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: Error when running “Trimmomatic flexible read trimming tool for Illumina NGS dat
2.3 years ago by rpolicastro 13k
2
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1
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1.1k
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Answer: Answer: replacing data frame row values with a shorter vector and fill other cells with
2.3 years ago by rpolicastro 13k
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1
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1.1k
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Comment: Comment: replacing data frame row values with a shorter vector and fill other cells with
2.3 years ago by rpolicastro 13k
1
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1
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2.3k
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Comment: Comment: Issues importing STARsolo's output into Seurat
2.3 years ago by rpolicastro 13k
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2
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2.3k
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Answer: Answer: Issues importing STARsolo's output into Seurat
2.3 years ago by rpolicastro 13k
2
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0
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2.8k
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Answer: Answer: Convert an R data.frame to a bed file in R
2.3 years ago by rpolicastro 13k
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1
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711
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Answer: Answer: Remove from enst name a unique eleven digit number from bam file
2.3 years ago by rpolicastro 13k
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0
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1.1k
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Comment: Comment: how to create (cases, controls, and NA) in a phenotype column based on IDs in an
2.3 years ago by rpolicastro 13k
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0
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2.7k
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Comment: Comment: What are the units for the sctransform SCT scale.data slots?
2.3 years ago by rpolicastro 13k
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1
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2.7k
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Comment: Comment: What are the units for the sctransform SCT scale.data slots?
2.3 years ago by rpolicastro 13k
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0
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882
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Comment: Comment: Clustering analysis for scRNA-seq
2.3 years ago by rpolicastro 13k
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1
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2.7k
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Comment: Comment: What are the units for the sctransform SCT scale.data slots?
2.3 years ago by rpolicastro 13k
1
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1
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927
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Comment: Comment: Validity of statistical tests with Single Cell
2.3 years ago by rpolicastro 13k
1
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1
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3.0k
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Comment: Comment: Loop for removing the complete missing rows in a n number of groups of a datafra
2.4 years ago by rpolicastro 13k
1
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1
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1.0k
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Answer: Answer: How can I filter genes >10 reads in at least 2 replicates
2.4 years ago by rpolicastro 13k
2
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1
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1.5k
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Comment: Comment: Batch concatenate fastq files in series?
2.4 years ago by rpolicastro 13k
4
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1
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1.5k
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Answer: Answer: Batch concatenate fastq files in series?
2.4 years ago by rpolicastro 13k
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0
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568
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Comment: Comment: Preparing fastq files
2.4 years ago by rpolicastro 13k
3
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2
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2.4k
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Comment: Comment: Error: missing values and NaN's not allowed if 'na.rm' is FALSE
2.4 years ago by rpolicastro 13k
0
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0
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720
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Comment: Comment: how can we covert raw counts to 1M normalize counts?
2.4 years ago by rpolicastro 13k
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2
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2.1k
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Comment: Comment: Filtering reads from aligned scRNA reads BAM file by filtered cells barcodes (CB
2.4 years ago by rpolicastro 13k
2
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0
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1.3k
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Comment: Comment: Output gene symbol instead of ENST ID in Kallisto
2.4 years ago by rpolicastro 13k
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0
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2.1k
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Comment: Comment: How to download genes from MSigdb in R?
2.4 years ago by rpolicastro 13k
2
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0
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2.1k
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Answer: Answer: How to download genes from MSigdb in R?
updated 2.4 years ago by 44k • written 2.4 years ago by 13k
2
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2
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3.0k
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Comment: Comment: Loop for removing the complete missing rows in a n number of groups of a datafra
2.4 years ago by rpolicastro 13k
1
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0
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1.9k
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Comment: Comment: select rows in a tab-delimited ed file
2.4 years ago by rpolicastro 13k
3
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0
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2.0k
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Answer: Answer: Skills for industry career in bioinformatics
2.4 years ago by rpolicastro 13k
3
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1
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3.0k
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Answer: Answer: Loop for removing the complete missing rows in a n number of groups of a datafra
2.4 years ago by rpolicastro 13k
0
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1
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3.2k
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Comment: Comment: mapping reads using kallisto - rna seq analysis
2.4 years ago by rpolicastro 13k
2
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1
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3.0k
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Comment: Comment: Loop for removing the complete missing rows in a n number of groups of a datafra
2.4 years ago by rpolicastro 13k
1
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0
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1.1k
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Comment: Comment: Logfold change
2.4 years ago by rpolicastro 13k
1
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1
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623
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Comment: Comment: gsea msigdb RNA-seq input file
2.4 years ago by rpolicastro 13k
1
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0
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1.0k
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Comment: Comment: Counting all samples numbers for every gene
2.4 years ago by rpolicastro 13k
1
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1
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1.2k
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Answer: Answer: SCRNA analysis
2.4 years ago by rpolicastro 13k
1,382 results • Page 8 of 28
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