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Comment: Comment: How to use Machine Learning to understand cell heterogeneity using single cell g
2.4 years ago by rpolicastro 13k
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Comment: Comment: feature counts script output help please help
2.4 years ago by rpolicastro 13k
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1.1k
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Comment: Comment: Get Intron sequence
2.4 years ago by rpolicastro 13k
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Comment: Comment: How to utilize the bai index file while parsing a BAM file
2.4 years ago by rpolicastro 13k
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Comment: Comment: biomaRt: Timeout on getBM().
2.4 years ago by rpolicastro 13k
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2.4k
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Comment: Comment: biomaRt: Timeout on getBM().
2.4 years ago by rpolicastro 13k
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Comment: Comment: Select a list of genes of interest to visualise in heatmap of DESeq object
2.4 years ago by rpolicastro 13k
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1.6k
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Comment: Comment: How to compare two sequence logo?
2.4 years ago by rpolicastro 13k
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1.8k
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Comment: Comment: analyzing a single cell and searching for a specific gene using single cell data
2.4 years ago by rpolicastro 13k
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Answer: Answer: Extract header from fasta file
2.4 years ago by rpolicastro 13k
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829
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Answer: Answer: How to edit the fasta headers in a multiline fasta file?
2.4 years ago by rpolicastro 13k
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2.2k
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Comment: Comment: Issues with newer Kallisto versions (aka 0.46.1)
2.4 years ago by rpolicastro 13k
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1.0k
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Comment: Comment: Detecting duplicated UMI in BAM file
2.4 years ago by rpolicastro 13k
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Comment: Comment: Scanpy
2.4 years ago by rpolicastro 13k
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4.7k
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Comment: Comment: Create an Rstudio environment with the latest R version
2.4 years ago by rpolicastro 13k
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1
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1.9k
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Answer: Answer: how many sequences are in genome file
2.4 years ago by rpolicastro 13k
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2
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4.9k
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Comment: Comment: STAR alignment getting KILLED in process. Please help!
2.4 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: Is 60,000 estimated cell per sample in sn/scRNASeq too high?
2.5 years ago by rpolicastro 13k
1
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1
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1.2k
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Comment: Comment: Is 60,000 estimated cell per sample in sn/scRNASeq too high?
2.5 years ago by rpolicastro 13k
2
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1
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668
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Answer: Answer: complexity in sn/scRNASeq explanation
2.5 years ago by rpolicastro 13k
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1.3k
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Comment: Comment: Resolving Salmon Errors?
2.5 years ago by rpolicastro 13k
2
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1
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1.7k
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Comment: Comment: What tools are available for downstream analysis of 10x scATAC-seq in entirely n
2.5 years ago by rpolicastro 13k
1
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1
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1.7k
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Answer: Answer: What tools are available for downstream analysis of 10x scATAC-seq in entirely n
2.5 years ago by rpolicastro 13k
8
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1
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6.9k
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Answer: Answer: Is it possible to create Seurat object with this data
2.5 years ago by rpolicastro 13k
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1
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3.7k
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Comment: Comment: Column lengths differ error (ArchR)
2.5 years ago by rpolicastro 13k
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1
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3.7k
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Comment: Comment: Column lengths differ error (ArchR)
2.5 years ago by rpolicastro 13k
2
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2
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3.7k
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Answer: Answer: Column lengths differ error (ArchR)
updated 2.5 years ago by 147k • written 2.5 years ago by 13k
2
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1.5k
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Comment: Comment: How binarize my data frame in R?
2.5 years ago by rpolicastro 13k
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1.5k
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Comment: Comment: How binarize my data frame in R?
2.5 years ago by rpolicastro 13k
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1
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999
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Comment: Comment: For downstream analysis from cellranger 10x scRNAseq eg. Seurat package, do you
2.5 years ago by rpolicastro 13k
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1
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1.4k
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Comment: Comment: snRNASeq: How to fix low fraction reads in cells and high fraction map to antise
2.5 years ago by rpolicastro 13k
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1
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778
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Comment: Comment: Likelihood that increase is not by chance
2.5 years ago by rpolicastro 13k
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1
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1.2k
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Comment: Comment: comparing fragmented RNA-seq to non-fragmented RNA-seq
2.5 years ago by rpolicastro 13k
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1
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1.1k
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Answer: Answer: Create a bed file bins from fasta?
2.5 years ago by rpolicastro 13k
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998
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Comment: Comment: Crossing Wires with GTF files
2.5 years ago by rpolicastro 13k
2
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836
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Answer: Answer: What's the point about single-cell sequencing?
2.5 years ago by rpolicastro 13k
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1
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1.7k
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Comment: Comment: Low mapping rate due to rRNA
2.5 years ago by rpolicastro 13k
3
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1
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2.0k
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Answer: Answer: DESeq2 installation error
2.5 years ago by rpolicastro 13k
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1.6k
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Comment: Comment: Find exon-exon spanning reads
2.5 years ago by rpolicastro 13k
1
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2
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838
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Comment: Comment: How to achieve dislocation comparison, filtering and fusion of adjacent rows in
2.5 years ago by rpolicastro 13k
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2.1k
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Answer: Answer: Calculating percentage of ribosomal genes in single cell data
2.5 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: Which statistic test should be used for GC-content comparison?
2.5 years ago by rpolicastro 13k
1
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1
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1.7k
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Comment: Comment: Batch correction for scRNAseq when wildtypes and mutants were sequenced in separ
2.5 years ago by rpolicastro 13k
4
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2
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1.2k
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Answer: Answer: Which statistic test should be used for GC-content comparison?
2.5 years ago by rpolicastro 13k
4
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1
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1.8k
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Answer: Answer: How to use R's loop to get the part of the aggregate matrix other than the many
2.5 years ago by rpolicastro 13k
1
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1
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995
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Comment: Comment: DESeq2 batch effects with nonuniform design matrix
2.5 years ago by rpolicastro 13k
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650
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Comment: Comment: Downstream validation to differential alternative splicing analysis from RNA-seq
2.5 years ago by rpolicastro 13k
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1
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1.6k
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Comment: Comment: Problem with the output of Deeptools PlotProfile: a strange pattern of repetitiv
2.5 years ago by rpolicastro 13k
1
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1
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995
views
Comment: Comment: DESeq2 batch effects with nonuniform design matrix
2.5 years ago by rpolicastro 13k
1
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1
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2.8k
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Comment: Comment: Plot multiple genes from dds data
2.5 years ago by rpolicastro 13k
1,382 results • Page 9 of 28
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