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Unicycler hybrid assembly run is frozen for 2 days with no error message
hybrid-assembly unicycler
9 weeks ago by langziv ▴ 70
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1
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366
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Comment: Comment: Hybrid assembly with Unicycler and multiple files of input
3 months ago by langziv ▴ 70
1
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3
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366
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Hybrid assembly with Unicycler and multiple files of input
unicycler assembly
updated 3 months ago by ★ 1.4k • written 3 months ago by ▴ 70
1
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9
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1.8k
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blast retrieves "N/A" for taxonomic data
blast blastn
updated 8 months ago by • 0 • written 4.0 years ago by ▴ 70
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0
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609
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Comment: Comment: Retrieving matched search terms when using NCBI's API
10 months ago by langziv ▴ 70
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1
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609
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Comment: Comment: Retrieving matched search terms when using NCBI's API
10 months ago by langziv ▴ 70
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4
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609
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Retrieving matched search terms when using NCBI's API
NCBI API
10 months ago by langziv ▴ 70
2
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2
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713
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RAST annotation of RNA-seq transcriptome results in some genes appearing more than once
R RNA-seq
updated 12 months ago by ★ 2.8k • written 13 months ago by ▴ 70
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4
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1.0k
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Error when trying to create a heatmap with DESeq2
R heatmaps RNA-seq DESeq2
updated 12 months ago by 44k • written 13 months ago by ▴ 70
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1
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1.0k
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Answer: Answer: Error when trying to create a heatmap with DESeq2
updated 12 months ago by 44k • written 13 months ago by ▴ 70
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0
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1.0k
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Comment: Comment: Error when trying to create a heatmap with DESeq2
13 months ago by langziv ▴ 70
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0
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1.0k
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Comment: Comment: Error when trying to create a heatmap with DESeq2
13 months ago by langziv ▴ 70
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0
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
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1
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
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1
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
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0
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
0
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1
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
0
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1
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
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0
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
0
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0
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
0
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1
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
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2
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
0
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0
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2.1k
views
Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
0
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1
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2.1k
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Comment: Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
13 months ago by langziv ▴ 70
0
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20
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2.1k
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Rockhoppper - Suspiciously low percentage of perfectly aligned reads
Rockhopper RNA-seq
13 months ago by langziv ▴ 70
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0
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1.0k
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Comment: Comment: Assessing Rockhopper's output
13 months ago by langziv ▴ 70
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1
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1.0k
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Comment: Comment: Assessing Rockhopper's output
14 months ago by langziv ▴ 70
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4
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1.0k
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Assessing Rockhopper's output
transcriptome Rockhopper RNA-seq de-novo-assembly
13 months ago by langziv ▴ 70
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0
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634
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Comment: Comment: ptt and rnt files that were created from assembly rather than a genome
14 months ago by langziv ▴ 70
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2
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634
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ptt and rnt files that were created from assembly rather than a genome
rockhopper genbank
14 months ago by langziv ▴ 70
1
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4
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817
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Running Rockhopper from a command-line
rockhopper java
14 months ago by langziv ▴ 70
1
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0
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817
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Answer: Answer: Running Rockhopper from a command-line
14 months ago by langziv ▴ 70
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1
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817
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Comment: Comment: Running Rockhopper from a command-line
14 months ago by langziv ▴ 70
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0
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1.7k
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Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
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1
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1.7k
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Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
0
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0
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1.7k
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Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
0
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0
replies
1.7k
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Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
0
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0
replies
1.7k
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Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
0
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0
replies
1.7k
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Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
0
votes
1
reply
1.7k
views
Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
0
votes
1
reply
1.7k
views
Comment: Comment: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by langziv ▴ 70
0
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13
replies
1.7k
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Dealing with transcriptome sequences that are smaller than their respective genes
blastn Trinity Transcriptome De-novo-transcriptome-assembly RNA-seq
updated 13 months ago by 44k • written 14 months ago by ▴ 70
0
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0
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360
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Associating between results obtained after running Trinity's run_DE_analysis.pl and genes
De-novo-transcriptome-assembly Trinity RNA-seq-analysis
14 months ago by langziv ▴ 70
3
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2
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669
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Differential gene expression analysis after transcriptome assembly with SPAdes
SPAdes differential-expression transcriptome-assembly
updated 14 months ago by 101k • written 14 months ago by ▴ 70
0
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0
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1.6k
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Comment: Comment: Quantification after transcriptome assembly with Trinity
14 months ago by langziv ▴ 70
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1
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1.6k
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Comment: Comment: Quantification after transcriptome assembly with Trinity
15 months ago by langziv ▴ 70
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0
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1.6k
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Comment: Comment: Quantification after transcriptome assembly with Trinity
15 months ago by langziv ▴ 70
2
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4
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721
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Trinity output directory can be erased only with root privileges
trinity
updated 15 months ago by 44k • written 15 months ago by ▴ 70
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1
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721
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Comment: Comment: Trinity output directory can be erased only with root privileges
15 months ago by langziv ▴ 70
0
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1
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1.6k
views
Comment: Comment: Quantification after transcriptome assembly with Trinity
15 months ago by langziv ▴ 70
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