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41
votes
11
replies
10k
views
How To Get Gene Regions +3Kb Upstream
ucsc gtf
updated 4.1 years ago by 20 • written 12.2 years ago by 2.8k
63
votes
16
replies
44k
views
11 follow
How To Analyze Imputed Gwas Data
gwas r snp imputation plink
updated 4.4 years ago by ▴ 70 • written 13.7 years ago by 2.8k
3
votes
0
replies
15k
views
Comment: C: How To Show The Name Of Genes On Manhattan Plot
updated 5.2 years ago by 44k • written 13.4 years ago by 2.8k
0
votes
0
replies
4.0k
views
Comment: C: Public Sources Of Gene Expression Data In Human Adipose Tissue?
updated 5.2 years ago by 44k • written 13.5 years ago by 2.8k
7
votes
5
replies
9.5k
views
Answer: A: Simple Retrieval Of 1000 Genomes Maf Using Rsids
updated 5.2 years ago by 44k • written 13.5 years ago by 2.8k
2
votes
0
replies
5.2k
views
Comment: C: Why Does A Rare Variant Need A Large Effect To Be Detected In Gwas?
updated 5.2 years ago by 44k • written 13.8 years ago by 2.8k
57
votes
7
replies
5.4k
views
6 follow
Bioinformatics Cores In A World Of Cloud Computing And Genome Factories
next-gen sequencing cloud core
updated 5.7 years ago by 22k • written 12.9 years ago by 2.8k
3
votes
0
replies
180k
views
Answer: A: How Can I Convert Bam To Sam?
updated 6.2 years ago by 44k • written 13.3 years ago by 2.8k
37
votes
17
replies
32k
views
11 follow
Get All The Genes In A Pathway (E.G. Kegg)
kegg pathway gwas gene
updated 6.2 years ago by 44k • written 13.4 years ago by 2.8k
0
votes
0
replies
1.5k
views
Job: Job: Bioinformatics Analyst at the University of Virginia, Charlottesville, VA, USA
R RNA-Seq ChIP-Seq
updated 18 months ago by 44k • written 6.4 years ago by 2.8k
0
votes
0
replies
2.0k
views
Job: Bioinformatics Analyst in University Virginia Bioinformatics Core
bioconductor deseq2 r
updated 18 months ago by 44k • written 6.6 years ago by 2.8k
0
votes
1
reply
30k
views
Comment: C: samtools: error while loading shared libraries: libbz2.so.1.0: cannot open share
7.2 years ago by Stephen 2.8k
60
votes
9
replies
23k
views
7 follow
Getting Allele Frequencies From 1000 Genomes
genome hapmap maf ucsc ensembl
updated 7.7 years ago by ▴ 170 • written 13.7 years ago by 2.8k
1
vote
0
replies
2.6k
views
Job: Bioinformatics analyst in University of Virginia Bioinformatics Core
ChIP-Seq RNA-Seq R
updated 19 months ago by 44k • written 8.4 years ago by 2.8k
12
votes
6
replies
7.3k
views
Mapping Snps To Genes (And Pathways, Go, Etc.)
pathway biomart kegg ensembl ncbi
updated 8.6 years ago by 20 • written 13.4 years ago by 2.8k
1
vote
0
replies
38k
views
Comment: C: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
9.2 years ago by Stephen 2.8k
19
votes
4
replies
14k
views
Rna-Seq With Cuffdiff: Use Merged.Gtf From Cuffmerge Or Combined.Gtf From Cuffcompare?
cufflinks cuffdiff rna gtf
updated 2.4 years ago by 44k • written 12.9 years ago by 2.8k
0
votes
0
replies
3.4k
views
Comment: Comment: For R workshop, need bio equivalent of 'diamonds' or 'nycflights13' data.
updated 2.6 years ago by 44k • written 9.8 years ago by 2.8k
16
votes
5
replies
3.4k
views
Forum: For R workshop, need bio equivalent of 'diamonds' or 'nycflights13' data.
dplyr workshop R
updated 2.6 years ago by 44k • written 9.8 years ago by 2.8k
15
votes
5
replies
4.0k
views
Public Sources Of Gene Expression Data In Human Adipose Tissue?
gene
updated 10.6 years ago by ▴ 40 • written 13.5 years ago by 2.8k
14
votes
3
replies
6.9k
views
Measuring Conservation For Short Motif
conservation transcription
updated 11.1 years ago by ▴ 10 • written 12.8 years ago by 2.8k
29
votes
15
replies
17k
views
7 follow
Get Flanking Sequence Given A List Of Positions
snp sequence biomart ucsc galaxy
updated 11.2 years ago by 20 • written 13.6 years ago by 2.8k
11
votes
4
replies
2.6k
views
Forum: Myopenid Shutting Down
openid
updated 21 months ago by 44k • written 11.2 years ago by 2.8k
3
votes
0
replies
5.3k
views
Answer: A: What Are Your Most-Used Public Data Repositories?
11.3 years ago by Stephen 2.8k
1
vote
0
replies
8.5k
views
Comment: C: New Free Community Tutorial Website For Bioinformatics Learning
11.3 years ago by Stephen 2.8k
9
votes
2
replies
11k
views
Answer: Answer: Automating Gorilla And/Or Revigo Analysis
updated 3.0 years ago by 44k • written 11.6 years ago by 2.8k
2
votes
0
replies
2.8k
views
Answer: A: Comparing Peaks Coming From Different Peak Calling Programs
11.6 years ago by Stephen 2.8k
4
votes
0
replies
3.9k
views
Answer: A: Resources For Video/Webcasts Of Talks/Seminars/Courses
11.6 years ago by Stephen 2.8k
0
votes
0
replies
15k
views
Comment: C: Annotating Genomic Intervals
12.1 years ago by Stephen 2.8k
1
vote
0
replies
15k
views
Comment: C: Annotating Genomic Intervals
12.2 years ago by Stephen 2.8k
37
votes
10
replies
15k
views
8 follow
Annotating Genomic Intervals
bedtools annotation r bioconductor
updated 12.2 years ago by 36k • written 12.2 years ago by 2.8k
0
votes
0
replies
15k
views
Comment: C: Annotating Genomic Intervals
12.2 years ago by Stephen 2.8k
4
votes
1
reply
7.5k
views
Answer: C: Extract Samples With Specific Rsid And Genotype Using Plink Or Similar Tools
12.2 years ago by Stephen 2.8k
0
votes
1
reply
20k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
12.2 years ago by Stephen 2.8k
13
votes
14
replies
20k
views
7 follow
Get Fasta File With Protein Sequences Given Entrez Gene Ids
entrez eutils fasta
updated 22 months ago by 44k • written 12.2 years ago by 2.8k
0
votes
1
reply
20k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
12.2 years ago by Stephen 2.8k
0
votes
0
replies
20k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
12.2 years ago by Stephen 2.8k
0
votes
1
reply
20k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
12.2 years ago by Stephen 2.8k
1
vote
4
replies
2.5k
views
Gene Names Of All Proteins Having A Tyrosine Residue
proteomics
updated 12.4 years ago by 10k • written 12.4 years ago by 2.8k
31
votes
7
replies
17k
views
Cufflinks / Cuffdiff Output - How Are Tests Different?
cufflinks cuffdiff galaxy gene
12.7 years ago by Stephen 2.8k
8
votes
6
replies
3.9k
views
How To Use Ests To Examine Gene Expression
est gene ncbi
updated 12.7 years ago by 16k • written 12.7 years ago by 2.8k
12
votes
0
replies
26k
views
Answer: A: Best Way For A Beginner To Get Up To Speed On Unix Quickly?
12.9 years ago by Stephen 2.8k
7
votes
0
replies
17k
views
Answer: A: Cufflinks / Cuffdiff Output - How Are Tests Different?
12.9 years ago by Stephen 2.8k
0
votes
0
replies
17k
views
Comment: C: Cufflinks / Cuffdiff Output - How Are Tests Different?
12.9 years ago by Stephen 2.8k
2
votes
2
replies
8.4k
views
Answer: A: Geo Data Matrix Using R
13.0 years ago by Stephen 2.8k
0
votes
0
replies
17k
views
Comment: C: Cufflinks / Cuffdiff Output - How Are Tests Different?
13.1 years ago by Stephen 2.8k
5
votes
1
reply
3.1k
views
Answer: A: Power Calculations: Snp X Environment
13.1 years ago by Stephen 2.8k
6
votes
1
reply
5.4k
views
Problem With Limma On Two-Color Factorial Design: Coefficients Not Estimable
r bioconductor microarray
updated 13.1 years ago by 5.2k • written 13.1 years ago by 2.8k
5
votes
1
reply
14k
views
Answer: A: What Are The Obsolete Research Topics In Bioinformatics?
13.2 years ago by Stephen 2.8k
0
votes
0
replies
32k
views
Comment: C: Get All The Genes In A Pathway (E.G. Kegg)
13.4 years ago by Stephen 2.8k
71 results • Page 1 of 2
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