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Answer: Answer: Align concatameric reads to region
2.3 years ago by stolarek.ir ▴ 700
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1.0k
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Comment: Comment: gtf2bed doesn't give gene_id in the bed file
2.3 years ago by stolarek.ir ▴ 700
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1.2k
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Answer: Answer: strand specific data
2.3 years ago by stolarek.ir ▴ 700
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8.3k
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Answer: A: Intersect multiple BED files
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 700
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2.6k
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Comment: C: How I can reduce the depth of a sequencing when I want to assemble it?
updated 5.0 years ago by 44k • written 9.0 years ago by ▴ 700
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5.2k
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Comment: C: Heatmap of Differentially Expressed Genes
updated 5.0 years ago by 44k • written 9.0 years ago by ▴ 700
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6.6k
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Comment: C: How to convert Affymetrix SNP IDs to dbSNP rs SNP names
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 700
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1
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847
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PacBio base modifications merging p6c2 and p4c2
PacBio base modifications
updated 5.7 years ago by ▴ 20 • written 5.7 years ago by ▴ 700
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6.0k
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Comment: C: Merging files in plink
6.7 years ago by stolarek.ir ▴ 700
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2.9k
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Answer: A: ABBA-BABA D statistics to pattern introgressed loci: applicable to RNA-seq data?
6.7 years ago by stolarek.ir ▴ 700
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4.4k
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Answer: A: STAR analysis and alignment
6.8 years ago by stolarek.ir ▴ 700
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1
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3.3k
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Comment: C: Illumina paired end read header difference- SPAdes bwa run ERROR
7.2 years ago by stolarek.ir ▴ 700
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3.4k
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Comment: C: RNASeq lane effect
7.2 years ago by stolarek.ir ▴ 700
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1
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5.0k
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Comment: C: long reads Pacbio SNP calling
7.2 years ago by stolarek.ir ▴ 700
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1
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5.0k
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Answer: A: long reads Pacbio SNP calling
7.2 years ago by stolarek.ir ▴ 700
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1.8k
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codeml, output tree topology different from the input tree
codeml paml
7.2 years ago by stolarek.ir ▴ 700
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12k
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Comment: C: Paired vs unpaired (DNA Sequencing)
7.3 years ago by stolarek.ir ▴ 700
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2.3k
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Comment: C: How to align multiple genomic regions simultaneously
7.3 years ago by stolarek.ir ▴ 700
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4.8k
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Answer: A: PLINK RECODING ISSUE
7.3 years ago by stolarek.ir ▴ 700
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1
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2.3k
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Comment: C: Ancestry Informative Markers
7.3 years ago by stolarek.ir ▴ 700
2
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1
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2.3k
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Comment: C: Ancestry Informative Markers
7.3 years ago by stolarek.ir ▴ 700
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1
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2.0k
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Comment: C: Difference between PATRIC's WGS and COMPLETE genomes
7.4 years ago by stolarek.ir ▴ 700
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0
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4.4k
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Comment: C: bwa mem misaligns my contigs to the reference by a few bases
7.4 years ago by stolarek.ir ▴ 700
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1
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4.4k
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Comment: C: bwa mem misaligns my contigs to the reference by a few bases
7.4 years ago by stolarek.ir ▴ 700
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3.9k
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Comment: C: How to interpret genotypes with DP=1 for a vcf file
7.6 years ago by stolarek.ir ▴ 700
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2.4k
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Comment: C: How to understand likelihood ratio (LR) in GWAS?
7.6 years ago by stolarek.ir ▴ 700
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0
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1.9k
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Comment: C: Calculating LD between specific alleles even if they are not the minor alleles
7.7 years ago by stolarek.ir ▴ 700
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0
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9.6k
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Comment: C: Samtools consensus sequence
7.7 years ago by stolarek.ir ▴ 700
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0
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4.3k
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Comment: C: Different alignments rates with bwa mem (0%) and bowtie2 (82%)
7.8 years ago by stolarek.ir ▴ 700
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0
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7.7k
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Comment: C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.8 years ago by stolarek.ir ▴ 700
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1
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7.7k
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Comment: C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.8 years ago by stolarek.ir ▴ 700
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7.7k
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Comment: C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.8 years ago by stolarek.ir ▴ 700
1
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1
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7.7k
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Comment: C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.8 years ago by stolarek.ir ▴ 700
2
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1
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7.7k
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Answer: C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.8 years ago by stolarek.ir ▴ 700
1
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0
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1.9k
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Comment: C: Estimate signifiant loci in GWAS
7.8 years ago by stolarek.ir ▴ 700
1
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0
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2.5k
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Comment: C: Reproductivity of publicly available reads
7.8 years ago by stolarek.ir ▴ 700
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0
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7.0k
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Comment: C: How to "haploidize" diploid SNPs data in a vcf file
7.8 years ago by stolarek.ir ▴ 700
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1
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2.5k
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Comment: C: Reproductivity of publicly available reads
7.8 years ago by stolarek.ir ▴ 700
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0
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2.3k
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Comment: C: Converting .sam to .bam with samtools and I get a new error with every repeated
7.8 years ago by stolarek.ir ▴ 700
2
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0
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2.5k
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Comment: C: Reproductivity of publicly available reads
7.8 years ago by stolarek.ir ▴ 700
1
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0
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1.7k
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Comment: C: Profile of methylation about the centromeres/telomeres of human
7.8 years ago by stolarek.ir ▴ 700
0
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1
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5.7k
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Comment: C: Antisense transcription - how to detect it?
7.8 years ago by stolarek.ir ▴ 700
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2.3k
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Comment: C: Conversion of genotype data: GEN format to matrix with genotypes encoded as 0, 1
7.8 years ago by stolarek.ir ▴ 700
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0
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2.3k
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Comment: C: How to do clustering of bacteria genome based on hamming distance.
7.8 years ago by stolarek.ir ▴ 700
1
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1
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3.8k
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Comment: C: What's a good PacBio CLR read simulator?
7.8 years ago by stolarek.ir ▴ 700
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0
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2.9k
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Comment: C: plink PED file - randomly select allele at heterozygous site and convert to homo
8.0 years ago by stolarek.ir ▴ 700
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0
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2.9k
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Comment: C: plink PED file - randomly select allele at heterozygous site and convert to homo
8.0 years ago by stolarek.ir ▴ 700
2
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3
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2.9k
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plink PED file - randomly select allele at heterozygous site and convert to homozygous
aDNA plink PED SNP Genotype
updated 8.0 years ago by ▴ 10 • written 8.8 years ago by ▴ 700
1
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0
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2.7k
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Answer: A: cd hit for removing sequence redundancy
8.0 years ago by stolarek.ir ▴ 700
0
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0
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13k
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Comment: C: GC content calculation
8.0 years ago by stolarek.ir ▴ 700
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