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Comment: Comment: How to make contrasts to find genes DE in one experimental group but NOT in othe
23 months ago by bkleiboeker ▴ 370
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How to make contrasts to find genes DE in one experimental group but NOT in others?
edgeR limma matrix design R
updated 23 months ago by ★ 7.7k • written 23 months ago by ▴ 370
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Comment: Comment: How to make contrasts to find genes DE in one experimental group but NOT in othe
23 months ago by bkleiboeker ▴ 370
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1.3k
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Comment: Comment: Strange results from limma output
23 months ago by bkleiboeker ▴ 370
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Comment: Comment: warning when installing "AnnotationDbi"
24 months ago by bkleiboeker ▴ 370
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Comment: Comment: qPCR assay Triplicate Ct SD
2.0 years ago by bkleiboeker ▴ 370
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1.5k
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Comment: Comment: Comparing multiple groups in edgeR
2.1 years ago by bkleiboeker ▴ 370
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Answer: Answer: Pan-cancer RNA-seq data normalization
2.1 years ago by bkleiboeker ▴ 370
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1.1k
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Comment: Comment: Design matrix for microarray experiment with covariates, cofactors, multiple fa
2.3 years ago by bkleiboeker ▴ 370
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3
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1.1k
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Design matrix for microarray experiment with covariates, cofactors, multiple factors, and one treatment?
mircoarray R matrix design limma
updated 2.3 years ago by 4.5k • written 2.3 years ago by ▴ 370
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Answer: Answer: What is the Sleuth intercept and how can Sleuth be used when you have >2 treatme
3.2 years ago by bkleiboeker ▴ 370
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Answer: Answer: RNA-seq gene list - HOMER Gene based analysis
3.5 years ago by bkleiboeker ▴ 370
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1.7k
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Comment: C: Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I ju
3.8 years ago by bkleiboeker ▴ 370
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1.7k
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Comment: C: Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I ju
3.8 years ago by bkleiboeker ▴ 370
7
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7
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1.7k
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Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I just not understand the statistics?
RNA-Seq R edgeR
updated 3.8 years ago by 44k • written 3.8 years ago by ▴ 370
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Comment: C: Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I ju
3.8 years ago by bkleiboeker ▴ 370
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0
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866
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Answer: A: Matching gene ids in R
3.9 years ago by bkleiboeker ▴ 370
3
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2.2k
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Answer: A: How to add gene names to DGEList and convert to csv? gro-seq groHMM
3.9 years ago by bkleiboeker ▴ 370
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