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0
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0
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340
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Dexseq non-stranded index error
dexseq
15 months ago by bart ▴ 50
0
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0
replies
411
views
Predict interactions between lncRNAs and other RNA types (mRNAs, miRNAs)
mRNA miRNA lncRNA
2.2 years ago by bart ▴ 50
0
votes
1
reply
907
views
Error: protect(): protection stack overflow model matrix
model.matrix
updated 2.2 years ago by 85k • written 2.2 years ago by ▴ 50
1
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0
replies
5.1k
views
Comment: Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
2.2 years ago by bart ▴ 50
0
votes
1
reply
5.1k
views
Comment: Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
2.3 years ago by bart ▴ 50
0
votes
1
reply
5.1k
views
Comment: Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
2.3 years ago by bart ▴ 50
1
vote
9
replies
5.1k
views
Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
pheatmap
2.2 years ago by bart ▴ 50
0
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0
replies
5.1k
views
Comment: Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
2.3 years ago by bart ▴ 50
0
votes
2
replies
5.1k
views
Comment: Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
2.3 years ago by bart ▴ 50
0
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0
replies
1.5k
views
Comment: Comment: Find exon-exon spanning reads
2.5 years ago by bart ▴ 50
0
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0
replies
1.5k
views
Comment: Comment: Find exon-exon spanning reads
2.5 years ago by bart ▴ 50
4
votes
3
replies
1.0k
views
PCA plot interpretation after accounting for batch effects with SVA
SVA plot PCA
updated 2.5 years ago by 4.5k • written 2.5 years ago by ▴ 50
0
votes
1
reply
2.4k
views
Comment: Comment: Difference in total gene counts between samples
2.5 years ago by bart ▴ 50
0
votes
1
reply
2.4k
views
Comment: Comment: Difference in total gene counts between samples
2.5 years ago by bart ▴ 50
0
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0
replies
2.4k
views
Comment: Comment: Difference in total gene counts between samples
2.5 years ago by bart ▴ 50
0
votes
1
reply
2.4k
views
Comment: Comment: Difference in total gene counts between samples
2.5 years ago by bart ▴ 50
0
votes
1
reply
2.4k
views
Comment: Comment: Difference in total gene counts between samples
2.5 years ago by bart ▴ 50
0
votes
2
replies
2.4k
views
Comment: Comment: Difference in total gene counts between samples
2.5 years ago by bart ▴ 50
5
votes
14
replies
2.4k
views
Difference in total gene counts between samples
rna-seq
updated 2.5 years ago by 14k • written 2.5 years ago by ▴ 50
1
vote
1
reply
1.2k
views
Set fixed amount of variables to use for lasso regression
learning lasso machine regression
updated 2.6 years ago by ★ 28k • written 2.6 years ago by ▴ 50
0
votes
1
reply
2.4k
views
Comment: Comment: Cannot differentiate between groups with heatmap
2.6 years ago by bart ▴ 50
2
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3
replies
887
views
Mitochondrial gene expression
RNA-seq mitochondria
updated 2.8 years ago by ▴ 30 • written 2.8 years ago by ▴ 50
0
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0
replies
887
views
Comment: Comment: Mitochondrial gene expression
2.8 years ago by bart ▴ 50
2
votes
1
reply
596
views
RNA transfer between human circulating cells and bacteria or contamination?
cells RNA Kraken2
updated 2.8 years ago by 101k • written 2.8 years ago by ▴ 50
0
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0
replies
1.1k
views
Comment: Comment: Disease signature based on one of the following: ribosomal RNA, bacterial RNA, m
2.8 years ago by bart ▴ 50
0
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3
replies
1.1k
views
Disease signature based on one of the following: ribosomal RNA, bacterial RNA, mitochondrial RNA
bacterial mitochondrial RNA ribosomal
2.8 years ago by bart ▴ 50
7
votes
10
replies
2.4k
views
6 follow
Cannot differentiate between groups with heatmap
deseq2 heatmap
updated 2.6 years ago by 85k • written 2.9 years ago by ▴ 50
0
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1
reply
2.4k
views
Comment: Comment: Cannot differentiate between groups with heatmap
2.9 years ago by bart ▴ 50
0
votes
0
replies
5.0k
views
Comment: Comment: Heatmap deseq2
2.9 years ago by bart ▴ 50
3
votes
2
replies
5.0k
views
Heatmap deseq2
deseq2 heatmap
2.9 years ago by bart ▴ 50
4
votes
5
replies
1.6k
views
DESeq2: "model matrix is not full rank"
DESeq2
updated 2.9 years ago by 20k • written 2.9 years ago by ▴ 50
0
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1
reply
1.6k
views
Comment: Comment: DESeq2: "model matrix is not full rank"
2.9 years ago by bart ▴ 50
1
vote
1
reply
699
views
deseq2 NA values in metadata
deseq2
updated 2.9 years ago by 85k • written 2.9 years ago by ▴ 50
0
votes
1
reply
984
views
Comment: Comment: No differentially expressed genes
3.0 years ago by bart ▴ 50
3
votes
3
replies
984
views
No differentially expressed genes
DESeq2 lncRNAs
updated 3.0 years ago by ▴ 140 • written 3.0 years ago by ▴ 50
0
votes
0
replies
795
views
Comment: Comment: stringtie does not show results of all genes
3.0 years ago by bart ▴ 50
0
votes
1
reply
795
views
stringtie does not show results of all genes
stringtie galaxy
3.0 years ago by bart ▴ 50
0
votes
0
replies
962
views
Comment: Comment: Finding counts of lncRNAs with htseq-count /featurecounts
3.0 years ago by bart ▴ 50
2
votes
1
reply
961
views
Differential expression analysis (DEA) of lncRNA
EdgeR lncRNA
updated 3.0 years ago by ★ 7.6k • written 3.1 years ago by ▴ 50
0
votes
2
replies
962
views
Finding counts of lncRNAs with htseq-count /featurecounts
RNA lncRNAs htseq-count non-coding
3.0 years ago by bart ▴ 50
2
votes
1
reply
758
views
Select human protein coding transcripts in Diamond
diamond blastx
updated 3.1 years ago by 147k • written 3.1 years ago by ▴ 50
0
votes
1
reply
980
views
Using dgelist function in EdgeR to calculate RPKM
rpkm edger dgelist
updated 3.1 years ago by ▴ 10 • written 3.1 years ago by ▴ 50
2
votes
1
reply
713
views
Consensus on poly-a selected lncRNAs for differential expression analysis
lncRNA
updated 3.1 years ago by 8.9k • written 3.1 years ago by ▴ 50
3
votes
3
replies
958
views
Importing multiple datasets into one folder
Galaxy
updated 3.2 years ago by 21k • written 3.2 years ago by ▴ 50
1
vote
0
replies
2.7k
views
Comment: Comment: Bioperl SeqIO.pm cannot be found
3.2 years ago by bart ▴ 50
1
vote
0
replies
1.4k
views
Comment: Comment: Finding differentially expressed lncRNA
3.2 years ago by bart ▴ 50
0
votes
2
replies
1.4k
views
Comment: Comment: Finding differentially expressed lncRNA
3.3 years ago by bart ▴ 50
2
votes
4
replies
1.4k
views
Finding differentially expressed lncRNA
Feelnc lncRNA
3.2 years ago by bart ▴ 50
0
votes
0
replies
2.7k
views
Comment: Comment: Bioperl SeqIO.pm cannot be found
updated 3.3 years ago by 88k • written 3.3 years ago by ▴ 50
0
votes
1
reply
2.7k
views
Comment: Comment: Bioperl SeqIO.pm cannot be found
3.3 years ago by bart ▴ 50
57 results • Page 1 of 2
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