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5
votes
3
replies
4.0k
views
IBD calculation with Plink
Plink IBD
updated 5.0 years ago by 11k • written 5.0 years ago by ★ 2.1k
0
votes
1
reply
3.4k
views
Comment: C: Postdoctoral Training Fellow - Bioinformatics (Francis Crick Institute, London)
updated 5.1 years ago by 44k • written 9.4 years ago by ★ 2.1k
0
votes
1
reply
3.5k
views
Comment: C: Concordance analysis using statistics/graphs/figures
updated 5.1 years ago by 44k • written 9.5 years ago by ★ 2.1k
1
vote
1
reply
2.6k
views
Marker vs SNPs vs Biomarker
genotype SNPs
5.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
6.2k
views
Comment: C: Expect Library - Bam-Readcount
updated 5.1 years ago by 44k • written 9.0 years ago by ★ 2.1k
5
votes
7
replies
4.9k
views
How do I find out the adaptor sequences for SRA data?
adaptor sra
updated 5.2 years ago by ▴ 60 • written 5.5 years ago by ★ 2.1k
2
votes
2
replies
1.0k
views
How to find virus sequence with no accession information?
genome HEV71
updated 5.5 years ago by 147k • written 5.5 years ago by ★ 2.1k
0
votes
1
reply
4.9k
views
Comment: C: How do I find out the adaptor sequences for SRA data?
5.5 years ago by MAPK ★ 2.1k
0
votes
1
reply
2.0k
views
log4perl error for RGAugury.pl tool
Rgenes
updated 5.5 years ago by • 0 • written 6.4 years ago by ★ 2.1k
15
votes
1
reply
10k
views
What are contig, singleton read and discordant mate pairs?
terminology
updated 2.4 years ago by 44k • written 8.8 years ago by ★ 2.1k
4
votes
6
replies
3.0k
views
How do I make this perl script work to fetch sequences from NCBI using gene symbols?
perl eutils
updated 5.6 years ago by ▴ 70 • written 6.1 years ago by ★ 2.1k
1
vote
1
reply
1.9k
views
What is the use of PCA in ethnicity correction
pca
updated 5.6 years ago by 20 • written 8.7 years ago by ★ 2.1k
1
vote
2
replies
1.2k
views
Submitting R package in Bioconductor with Plink and vcftools Dependencies
R bioconductor
5.7 years ago by MAPK ★ 2.1k
1
vote
5
replies
1.4k
views
How can I analyze this data in Deseq?
deseq rnaseq deseq2 R
5.7 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.4k
views
Comment: C: How can I analyze this data in Deseq?
5.7 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.4k
views
Comment: C: How can I analyze this data in Deseq?
5.7 years ago by MAPK ★ 2.1k
5
votes
7
replies
2.0k
views
Extract coverage from each nucleotide position of a genome in a bam file
bam bed coverage
5.7 years ago by MAPK ★ 2.1k
0
votes
1
reply
2.0k
views
Comment: C: Extract coverage from each nucleotide position of a genome in a bam file
5.7 years ago by MAPK ★ 2.1k
0
votes
2
replies
2.0k
views
Comment: C: Extract coverage from each nucleotide position of a genome in a bam file
5.7 years ago by MAPK ★ 2.1k
9
votes
4
replies
6.5k
views
coverage plot for all chromosomes
RNA-Seq
5.7 years ago by MAPK ★ 2.1k
7
votes
5
replies
24k
views
How to perform KEGG pathway analysis in R?
KEGG
updated 6.0 years ago by ▴ 20 • written 7.2 years ago by ★ 2.1k
0
votes
1
reply
871
views
Where can I find Intergenic regions (non-rRNA), retrotransposons and Ribosomal RNA sequences?
next-gen assembly
updated 6.0 years ago by 35k • written 6.0 years ago by ★ 2.1k
0
votes
0
replies
1.2k
views
Comment: C: How can I map certain values for gene locus against genome?
6.0 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.2k
views
Comment: C: How can I map certain values for gene locus against genome?
6.0 years ago by MAPK ★ 2.1k
3
votes
4
replies
1.2k
views
How can I map certain values for gene locus against genome?
r
6.0 years ago by MAPK ★ 2.1k
5
votes
11
replies
1.4k
views
Adaptor trimming for RNAseq
RNA-Seq
6.0 years ago by MAPK ★ 2.1k
0
votes
0
replies
1.4k
views
Comment: C: Adaptor trimming for RNAseq
6.0 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.4k
views
Comment: C: Adaptor trimming for RNAseq
6.0 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.4k
views
Comment: C: Adaptor trimming for RNAseq
6.0 years ago by MAPK ★ 2.1k
0
votes
2
replies
1.1k
views
Tools to predict microRNAs in Ascomycota(Fungus)
smallRNA RNA-Seq microRNA
updated 6.1 years ago by ★ 2.4k • written 6.1 years ago by ★ 2.1k
0
votes
0
replies
4.8k
views
Comment: C: desktop bioinformatics platform specs
6.1 years ago by MAPK ★ 2.1k
11
votes
6
replies
3.0k
views
How do I loop over a list of gene symbols to extract sequences from NCBI?
ncbi eutils bash
6.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
3.0k
views
Comment: C: How do I loop over a list of gene symbols to extract sequences from NCBI?
6.1 years ago by MAPK ★ 2.1k
0
votes
1
reply
3.0k
views
Comment: C: How do I loop over a list of gene symbols to extract sequences from NCBI?
6.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
4.4k
views
Comment: C: How do I set filter for NCBI esearch to get fasta for Genes only?
6.1 years ago by MAPK ★ 2.1k
18
votes
7
replies
4.4k
views
How do I set filter for NCBI esearch to get fasta for Genes only?
esearch
6.1 years ago by MAPK ★ 2.1k
0
votes
2
replies
4.4k
views
Comment: C: How do I set filter for NCBI esearch to get fasta for Genes only?
6.1 years ago by MAPK ★ 2.1k
0
votes
1
reply
3.0k
views
Comment: C: How do I make this perl script work to fetch sequences from NCBI using gene symb
6.1 years ago by MAPK ★ 2.1k
0
votes
1
reply
3.0k
views
Comment: C: How do I make this perl script work to fetch sequences from NCBI using gene symb
6.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
1.9k
views
Comment: C: DEseq2 logfold interpretation
6.1 years ago by MAPK ★ 2.1k
9
votes
3
replies
1.9k
views
DEseq2 logfold interpretation
DEseq2 RNA-Seq
6.1 years ago by MAPK ★ 2.1k
6
votes
5
replies
1.5k
views
Extract sequence ID from Fasta for a given sequence
Fasta
updated 6.1 years ago by ★ 3.9k • written 6.1 years ago by ★ 2.1k
0
votes
0
replies
1.5k
views
Comment: C: Extract sequence ID from Fasta for a given sequence
6.1 years ago by MAPK ★ 2.1k
0
votes
3
replies
2.2k
views
How to submit paired-end fastq files of a single sample to SRA?
sra
updated 6.1 years ago by 20 • written 6.3 years ago by ★ 2.1k
0
votes
0
replies
1.8k
views
Microbiome data analysis using Vegan R tool
vegan microbiome
updated 6.1 years ago by 20 • written 6.2 years ago by ★ 2.1k
0
votes
1
reply
1.3k
views
Comment: C: What is the fate of low coverage region during Trinity assembly of transcriptome
6.1 years ago by MAPK ★ 2.1k
1
vote
3
replies
1.3k
views
What is the fate of low coverage region during Trinity assembly of transcriptome data?
Trinity transcriptome Assembly
6.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
1.5k
views
Comment: C: Dealing with NAs in microbiome transcriptome count data for differential express
6.2 years ago by MAPK ★ 2.1k
0
votes
2
replies
1.5k
views
Dealing with NAs in microbiome transcriptome count data for differential expression
RNA-Seq Deseq2 microbiome
6.2 years ago by MAPK ★ 2.1k
0
votes
0
replies
2.7k
views
Comment: C: How do you identify the contigs from trinity assembly?
6.2 years ago by MAPK ★ 2.1k
560 results • Page 3 of 12
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