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0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
1.1k
views
Discrepancy in Copy Number Alteration between different cancer stages
copy number alteration
cancer stages
updated 6.2 years ago by
thomaskuilman
▴ 850 • written 6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
7.5k
views
Comment:
C: ClusterProfiler cannot map any gene
6.2 years ago by
nazaninhoseinkhan
▴ 530
5
votes
4
replies
7.5k
views
ClusterProfiler cannot map any gene
clusterProfiler
EnsemblIDs
biomaRt
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
2.2k
views
Comment:
C: problem in getting results from variant effect predictor(VEP)
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
0
replies
2.2k
views
Comment:
C: problem in getting results from variant effect predictor(VEP)
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
6
replies
2.2k
views
problem in getting results from variant effect predictor(VEP)
VEP
online
error message
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
2.2k
views
Answer:
A: problem in getting results from variant effect predictor(VEP)
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
1.2k
views
Comment:
C: changing the pattern of expression in two sequential stages of cancer
6.2 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
1.2k
views
Comment:
C: changing the pattern of expression in two sequential stages of cancer
6.2 years ago by
nazaninhoseinkhan
▴ 530
3
votes
5
replies
1.2k
views
changing the pattern of expression in two sequential stages of cancer
cancer stages
converse pattern of expression
updated 6.2 years ago by
Kevin Blighe
88k • written 6.2 years ago by
nazaninhoseinkhan
▴ 530
1
vote
0
replies
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
1
vote
2
replies
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
2
votes
10
replies
2.6k
views
problem with using gtf file in cufflinks in Galaxy
RNA-Seq
GTF
Cufflinks
FPKM
updated 6.3 years ago by
Biostar
20 • written 8.6 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
0
replies
1.5k
views
Comment:
C: Copy number variation between different cancer stages
6.3 years ago by
nazaninhoseinkhan
▴ 530
4
votes
2
replies
1.5k
views
Copy number variation between different cancer stages
CNV analysis
different cancer stages
updated 6.3 years ago by
Kevin Blighe
88k • written 6.3 years ago by
nazaninhoseinkhan
▴ 530
1
vote
2
replies
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
1
vote
0
replies
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
6.6k
views
Comment:
C: Annotation of huge number of CNV files
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
2
replies
6.6k
views
Comment:
C: Annotation of huge number of CNV files
updated 6.3 years ago by
WouterDeCoster
47k • written 6.3 years ago by
nazaninhoseinkhan
▴ 530
19
votes
43
replies
6.6k
views
Annotation of huge number of CNV files
CNV annotation TCGA
6.3 years ago by
nazaninhoseinkhan
▴ 530
1
vote
0
replies
2.5k
views
Comment:
C: no significant FDR in gene enrichment analysis
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
2.5k
views
Comment:
C: no significant FDR in gene enrichment analysis
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
2.5k
views
Comment:
C: no significant FDR in gene enrichment analysis
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
2.5k
views
Comment:
C: no significant FDR in gene enrichment analysis
6.3 years ago by
nazaninhoseinkhan
▴ 530
2
votes
8
replies
2.5k
views
no significant FDR in gene enrichment analysis
rna-seq
DEGs
enrichment
FDR
6.3 years ago by
nazaninhoseinkhan
▴ 530
0
votes
0
replies
4.4k
views
Comment:
C: removing outliers before running DESeq2
6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
4.4k
views
Comment:
C: removing outliers before running DESeq2
6.4 years ago by
nazaninhoseinkhan
▴ 530
3
votes
5
replies
4.4k
views
removing outliers before running DESeq2
RNA-Seq
outliers
deseq2
updated 6.4 years ago by
Arup Ghosh
3.2k • written 6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
0
replies
7.1k
views
Comment:
C: what logFC or adj-p value cutoff should be chosen when the number of samples in
6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
7.1k
views
Comment:
C: what logFC or adj-p value cutoff should be chosen when the number of samples in
6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
7.1k
views
Comment:
C: what logFC or adj-p value cutoff should be chosen when the number of samples in
6.4 years ago by
nazaninhoseinkhan
▴ 530
3
votes
6
replies
7.1k
views
what logFC or adj-p value cutoff should be chosen when the number of samples in one of the conditions is too small?
RNA-Seq
DESeq2
small number of normal samples
updated 6.4 years ago by
Kevin Blighe
88k • written 6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
2
replies
1.9k
views
Illumina BeadChip Array probe file Vs control probe file
Illumina
BeadChip Array
Control probe file
updated 6.4 years ago by
Biostar
20 • written 6.6 years ago by
nazaninhoseinkhan
▴ 530
0
votes
0
replies
5.6k
views
Comment:
C: problem in EnsemblID to gene symbol conversion in TCGA data
6.4 years ago by
nazaninhoseinkhan
▴ 530
12
votes
13
replies
5.6k
views
6 follow
problem in EnsemblID to gene symbol conversion in TCGA data
RNA-Seq
TCGA
read counts
ensembl
updated 2.2 years ago by
LayneSadler
▴ 90 • written 6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
0
replies
5.6k
views
Comment:
C: problem in EnsemblID to gene symbol conversion in TCGA data
6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
2
replies
5.6k
views
Comment:
C: problem in EnsemblID to gene symbol conversion in TCGA data
6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
1.8k
views
Comment:
C: what TCGA biospecimen filter should be selected for retrieving "invasive ductal
6.4 years ago by
nazaninhoseinkhan
▴ 530
0
votes
1
reply
1.8k
views
Comment:
C: what TCGA biospecimen filter should be selected for retrieving "invasive ductal
6.4 years ago by
nazaninhoseinkhan
▴ 530
2
votes
5
replies
1.8k
views
what TCGA biospecimen filter should be selected for retrieving "invasive ductal breast carcinoma" data?
TCGA
invasive ductal carcinoma
6.4 years ago by
nazaninhoseinkhan
▴ 530
304 results • Page
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