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Comment: C: Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
6.1 years ago by Biogeek ▴ 470
0
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0
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1.8k
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Comment: C: Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
6.1 years ago by Biogeek ▴ 470
0
votes
0
replies
1.8k
views
Comment: C: Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
6.1 years ago by Biogeek ▴ 470
1
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7
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1.8k
views
Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
RNA-Seq mapping low alignment GC content
6.1 years ago by Biogeek ▴ 470
0
votes
3
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3.1k
views
Going from BlastX to GO annotation
Annotation blastx GO ONTOLOGY
updated 6.2 years ago by 44k • written 8.8 years ago by ▴ 470
1
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3
replies
3.9k
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Biological variation within replicate groups, not much DE
biological variation
updated 6.2 years ago by 44k • written 8.7 years ago by ▴ 470
0
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0
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3.9k
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Comment: C: Biological variation within replicate groups, not much DE
updated 6.2 years ago by 44k • written 8.7 years ago by ▴ 470
1
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0
replies
1.9k
views
Pathway enrichment and interaction analysis of genes in plants?
interaction pathway enrichment
updated 6.2 years ago by 20 • written 8.2 years ago by ▴ 470
0
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0
replies
1.2k
views
Conditional reciprocal blast confusion
crb-blast
6.7 years ago by Biogeek ▴ 470
6
votes
2
replies
1.5k
views
QTL /linkage trait mapping
QTL / linkage trait mapping
updated 6.8 years ago by 6.6k • written 6.8 years ago by ▴ 470
0
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1
reply
11k
views
Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
7.1 years ago by Biogeek ▴ 470
0
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1
reply
11k
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Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
7.1 years ago by Biogeek ▴ 470
0
votes
2
replies
11k
views
Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
7.1 years ago by Biogeek ▴ 470
0
votes
1
reply
11k
views
Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
7.1 years ago by Biogeek ▴ 470
5
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13
replies
11k
views
Heatmap.2 - flip dendrogram so control group appears on LHS?
R heatmap
updated 7.1 years ago by ★ 1.1k • written 7.1 years ago by ▴ 470
0
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1
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11k
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Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
7.1 years ago by Biogeek ▴ 470
4
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4
replies
5.4k
views
choosing a suitable max intron size for STAR (plant alignment)
intron size star plants
updated 7.3 years ago by • 0 • written 8.3 years ago by ▴ 470
3
votes
3
replies
5.8k
views
Can you pool individuals to make 1 biological replicate?
biological-replicates RNA-Seq
updated 22 months ago by 44k • written 9.5 years ago by ▴ 470
0
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1
reply
1.6k
views
Easier way to filter contaminants based on protein similarity ?
diamond blastx uniprot trembl
updated 8.1 years ago by ★ 2.4k • written 8.1 years ago by ▴ 470
0
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1
reply
1.8k
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Comment: C: weird e-values with rapsearch
8.1 years ago by Biogeek ▴ 470
0
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0
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1.1k
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Comment: C: swiss-prot size reduction
8.1 years ago by Biogeek ▴ 470
0
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0
replies
1.3k
views
Do I need to re-normalize?
RNA-Seq normalization
8.1 years ago by Biogeek ▴ 470
0
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0
replies
4.5k
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Comment: C: Parsing uniprot .dat files
8.2 years ago by Biogeek ▴ 470
1
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9
replies
4.5k
views
Parsing uniprot .dat files
Annotation uniprot parsing
updated 8.2 years ago by ★ 2.4k • written 8.2 years ago by ▴ 470
1
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0
replies
3.9k
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Comment: C: STAR BAM into RSEM
8.2 years ago by Biogeek ▴ 470
1
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1
reply
3.9k
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Comment: C: STAR BAM into RSEM
8.2 years ago by Biogeek ▴ 470
9
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4
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3.9k
views
STAR BAM into RSEM
RSEM star forward-prob
updated 8.2 years ago by 104k • written 8.2 years ago by ▴ 470
0
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0
replies
2.7k
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Answer: A: HIGH BCV in EdgeR, any ideas?
8.2 years ago by Biogeek ▴ 470
1
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4
replies
2.7k
views
HIGH BCV in EdgeR, any ideas?
EdgeR BCV GLM high dispersion
8.2 years ago by Biogeek ▴ 470
0
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1
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2.7k
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Comment: C: HIGH BCV in EdgeR, any ideas?
8.2 years ago by Biogeek ▴ 470
1
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1
reply
3.9k
views
Comment: C: de novo transcriptome assembly
8.2 years ago by Biogeek ▴ 470
1
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0
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7.1k
views
Answer: A: I am really pissed off by the bioinformatics software world. Do/can we have a be
8.2 years ago by Biogeek ▴ 470
0
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1
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3.9k
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Comment: C: de novo transcriptome assembly
8.2 years ago by Biogeek ▴ 470
0
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1
reply
4.2k
views
Comment: C: Time-series or pairwise comparison EdgeR - what's more suited?
8.2 years ago by Biogeek ▴ 470
0
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1
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3.9k
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Comment: C: de novo transcriptome assembly
8.2 years ago by Biogeek ▴ 470
1
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1
reply
3.9k
views
Comment: C: de novo transcriptome assembly
8.2 years ago by Biogeek ▴ 470
0
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0
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3.9k
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Comment: C: de novo transcriptome assembly
8.2 years ago by Biogeek ▴ 470
0
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1
reply
3.9k
views
Comment: C: de novo transcriptome assembly
8.2 years ago by Biogeek ▴ 470
1
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5
replies
4.2k
views
Time-series or pairwise comparison EdgeR - what's more suited?
DGE-analysis Time-series pairwise
updated 18 months ago by 44k • written 8.2 years ago by ▴ 470
0
votes
2
replies
1.8k
views
Experience with SOAP trans
soap trans de novo
updated 8.2 years ago by 20 • written 8.3 years ago by ▴ 470
0
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1
reply
4.9k
views
Comment: C: Finding orthologous gene within species
8.2 years ago by Biogeek ▴ 470
0
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0
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4.9k
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Comment: C: Finding orthologous gene within species
8.2 years ago by Biogeek ▴ 470
0
votes
1
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4.9k
views
Answer: A: Finding orthologous gene within species
8.2 years ago by Biogeek ▴ 470
1
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1
reply
2.9k
views
Answer: A: Determining Paired-end or Mate-pair insert length in De Novo Sequencing
8.2 years ago by Biogeek ▴ 470
0
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0
replies
4.5k
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Comment: C: Parsing uniprot .dat files
8.2 years ago by Biogeek ▴ 470
0
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1
reply
4.5k
views
Comment: C: Parsing uniprot .dat files
8.2 years ago by Biogeek ▴ 470
0
votes
1
reply
4.5k
views
Comment: C: Parsing uniprot .dat files
8.2 years ago by Biogeek ▴ 470
0
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1
reply
4.5k
views
Comment: C: Parsing uniprot .dat files
8.2 years ago by Biogeek ▴ 470
3
votes
7
replies
2.8k
views
tr2aacds memory issues
tr2aacds evidential gene memory issues
updated 8.2 years ago by ▴ 160 • written 8.3 years ago by ▴ 470
1
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1
reply
3.7k
views
Answer: A: merging all coordinate-sorted bam files for Trinity genome-guided approach?
8.2 years ago by Biogeek ▴ 470
187 results • Page 2 of 4
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