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cellchat analysis from from a Scanpy h5ad file
scanpy
r
h5ad
CellChat
cellchat
10 months ago by
cgp09741
▴ 10
0
votes
0
replies
1.1k
views
Comment:
Comment: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
14 months ago by
cgp09741
▴ 10
0
votes
2
replies
1.1k
views
Comment:
Comment: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
updated 14 months ago by
Ram
44k • written 14 months ago by
cgp09741
▴ 10
1
vote
4
replies
1.1k
views
Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
ATAC-seq
multiomic
signac
updated 14 months ago by
Ram
44k • written 14 months ago by
cgp09741
▴ 10
0
votes
0
replies
374
views
Monocle2 Feature Plot
FeaturePlot
Seurat
Monocle
2.0 years ago by
cgp09741
▴ 10
1
vote
1
reply
686
views
Extract Monocle2 "State" for Seurat
FindMarkers
Monocle
Seurat
DEG
Monocle2
updated 2.0 years ago by
fracarb8
★ 1.7k • written 2.0 years ago by
cgp09741
▴ 10
2
votes
2
replies
745
views
Identifying DEG's on Integrated samples
Seurat
DEG
updated 2.2 years ago by
AB
▴ 360 • written 2.2 years ago by
cgp09741
▴ 10
0
votes
1
reply
2.1k
views
Comment:
Comment: DESeq2 dds Creation
2.3 years ago by
cgp09741
▴ 10
0
votes
1
reply
2.1k
views
Comment:
Comment: DESeq2 dds Creation
2.3 years ago by
cgp09741
▴ 10
1
vote
5
replies
2.1k
views
DESeq2 dds Creation
deseq2
updated 2.3 years ago by
ATpoint
85k • written 2.3 years ago by
cgp09741
▴ 10
0
votes
1
reply
8.0k
views
Comment:
Comment: How to transform the deg gene list from seurat to a gene list input to clusterPr
3.3 years ago by
cgp09741
▴ 10
1
vote
0
replies
3.5k
views
Comment:
Comment: FindMarkers for ClusterProfiler
3.3 years ago by
cgp09741
▴ 10
1
vote
2
replies
3.5k
views
FindMarkers for ClusterProfiler
ClusterProfiler
gseGO
enrichGO
3.3 years ago by
cgp09741
▴ 10
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