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381
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PCA Plotting Differences Before and After Batch Correction in RNA-seq for Meta-Analysis
batch RNA-seq correction PCA
updated 9 days ago by ★ 2.0k • written 10 days ago by ▴ 20
0
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0
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381
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Comment: Comment: PCA Plotting Differences Before and After Batch Correction in RNA-seq for Meta-
10 days ago by Nelo ▴ 20
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1
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1.9k
views
Comment: Comment: RNA-SEQ where only a subset of genes is of interest
8 weeks ago by Nelo ▴ 20
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1
reply
242
views
How to handle Single-Level Batch Variable for Batch Correction in RNA-Seq Data
Combat RNA-seq batch-correction
updated 11 weeks ago by 44k • written 11 weeks ago by ▴ 20
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1
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386
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Batch Effect Correction in RNA-seq Data Using SVA and DESeq2
SVA Batch DESeq2 RNA-seq
updated 12 weeks ago by 88k • written 3 months ago by ▴ 20
0
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0
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186
views
How to Accurately Determine Unique Mapped Reads from HISAT2 Output summary file
mapped unique analysis Hisat2 RNA-seq
updated 3 months ago by 147k • written 3 months ago by ▴ 20
8
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12
replies
2.3k
views
7 follow
How to speed-up to contruct phylogenetic tree
MEGA tree phylogenetic
updated 8 months ago by 21k • written 11 months ago by ▴ 20
0
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1
reply
371
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Issue with Image Display and Saving on AgriGO v2 Platform
plants AgriGO gene-ontology non-model
updated 8 months ago by 44k • written 8 months ago by ▴ 20
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0
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2.3k
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Comment: Comment: How to speed-up to contruct phylogenetic tree
11 months ago by Nelo ▴ 20
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0
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2.3k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
11 months ago by Nelo ▴ 20
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0
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2.3k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
11 months ago by Nelo ▴ 20
0
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2
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2.3k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
11 months ago by Nelo ▴ 20
13
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6
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856
views
6 follow
how to sort fasta file according to a header file
fasta
updated 12 months ago by 44k • written 12 months ago by ▴ 20
1
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1
reply
856
views
Comment: Comment: how to sort fasta file accroding to header
12 months ago by Nelo ▴ 20
0
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1
reply
541
views
meta-analysis
meta-analysis
updated 12 months ago by 85k • written 12 months ago by ▴ 20
2
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6
replies
980
views
batch correction in DESeq2
DESeq2
updated 12 months ago by 44k • written 12 months ago by ▴ 20
0
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0
replies
980
views
Comment: Comment: batch correction in DESeq2
12 months ago by Nelo ▴ 20
0
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1
reply
980
views
Comment: Comment: batch correction in DESeq2
12 months ago by Nelo ▴ 20
0
votes
1
reply
980
views
Comment: Comment: batch correction in DESeq2
updated 12 months ago by 85k • written 12 months ago by ▴ 20
2
votes
4
replies
903
views
command to extract SRA fastq data summary
edirect NCBI SRA
updated 15 months ago by 147k • written 15 months ago by ▴ 20
0
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1
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903
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Comment: Comment: command to extract SRA fastq data summary
15 months ago by Nelo ▴ 20
2
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4
replies
1.9k
views
To identify Differentially Expressed Genes and Unraveling Upregulated and Downregulated Genes using DESeq2 in R
R DEGs DESeq2
updated 15 months ago by 88k • written 15 months ago by ▴ 20
0
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1
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1.9k
views
Comment: Comment: To identify Differentially Expressed Genes and Unraveling Upregulated and Downre
15 months ago by Nelo ▴ 20
0
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0
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1.9k
views
Comment: Comment: To identify Differentially Expressed Genes and Unraveling Upregulated and Downre
15 months ago by Nelo ▴ 20
0
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0
replies
983
views
Comment: Comment: fisher's method for p-value combination in meta-analysis
updated 16 months ago by 15k • written 16 months ago by ▴ 20
2
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2
replies
983
views
fisher's method for p-value combination in meta-analysis
Differential p-value fisher expression study
updated 16 months ago by 15k • written 16 months ago by ▴ 20
1
vote
1
reply
600
views
DESeq2 with multiple factors
DESeq2
updated 18 months ago by ★ 1.8k • written 18 months ago by ▴ 20
1
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6
replies
1.1k
views
DESeq2
heatmap R DESeq2
18 months ago by Nelo ▴ 20
0
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0
replies
1.1k
views
Comment: Comment: DESeq2
18 months ago by Nelo ▴ 20
0
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1
reply
1.1k
views
Comment: Comment: DESeq2
19 months ago by Nelo ▴ 20
0
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1
reply
1.1k
views
Comment: Comment: DESeq2
19 months ago by Nelo ▴ 20
3
votes
6
replies
2.1k
views
when to use trimmomatic
trimmomatic multiqc sra
updated 19 months ago by ▴ 250 • written 19 months ago by ▴ 20
0
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1
reply
2.1k
views
Comment: Comment: when to use trimmomatic
19 months ago by Nelo ▴ 20
1
vote
1
reply
683
views
Replace header of fasta file according to another file
fasta
updated 21 months ago by 44k • written 21 months ago by ▴ 20
0
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1
reply
1.4k
views
Comment: Comment: extract pattern using grep/sed
21 months ago by Nelo ▴ 20
1
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4
replies
1.4k
views
extract pattern using grep/sed
grep linux sed
updated 21 months ago by 44k • written 21 months ago by ▴ 20
0
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0
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2.7k
views
Comment: Comment: how to automate this process
21 months ago by Nelo ▴ 20
0
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0
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856
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Comment: Comment: promoter analysis in plant
21 months ago by Nelo ▴ 20
0
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1
reply
4.3k
views
Comment: Comment: fastq-dump download pair-end fastq without split-files
22 months ago by Nelo ▴ 20
0
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0
replies
856
views
Comment: Comment: promoter analysis in plant
22 months ago by Nelo ▴ 20
0
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3
replies
856
views
promoter analysis in plant
GAD plantCARE script python result
21 months ago by Nelo ▴ 20
0
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1
reply
1.3k
views
Comment: Comment: Command to insert column with text according to specific text in another column
2.2 years ago by Nelo ▴ 20
0
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1
reply
1.3k
views
Comment: Comment: Command to insert column with text according to specific text in another column
2.2 years ago by Nelo ▴ 20
2
votes
6
replies
1.3k
views
Command to insert column with text according to specific text in another column
commands unix
updated 2.2 years ago by 88k • written 2.2 years ago by ▴ 20
0
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0
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2.6k
views
Comment: Comment: How to run microsynteny plotter from McScan?
2.2 years ago by Nelo ▴ 20
0
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0
replies
541
views
Comment: Comment: How to modify the result rank of Multiple sequence alignment
2.8 years ago by Nelo ▴ 20
0
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1
reply
541
views
How to modify the result rank of Multiple sequence alignment
rearrange FASTA MSA
2.8 years ago by Nelo ▴ 20
0
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1
reply
1.1k
views
Comment: Comment: What should be the best parameter to perform blastp
2.9 years ago by Nelo ▴ 20
0
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3
replies
1.1k
views
What should be the best parameter to perform blastp
command parameter Blastp line
updated 2.9 years ago by 147k • written 2.9 years ago by ▴ 20
0
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1
reply
1.5k
views
Comment: Comment: Information like Genome size, gene count, chromosomes numbers, contigs and scaff
2.9 years ago by Nelo ▴ 20
82 results • Page 1 of 2
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