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Answer: A: Is GATK overestimating the heterozygous calls?
7.4 years ago by andrew.j.skelton73 6.6k
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3.1k
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Answer: A: RNAseq variant filtering criteria
7.4 years ago by andrew.j.skelton73 6.6k
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Comment: C: Are transcription factors some kind of eQTLs?
7.4 years ago by andrew.j.skelton73 6.6k
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2.7k
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Comment: C: Cis- eQTL Question
7.4 years ago by andrew.j.skelton73 6.6k
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2.7k
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Answer: A: Cis- eQTL Question
7.4 years ago by andrew.j.skelton73 6.6k
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1.5k
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Answer: A: CUfflink data for statistical test
7.4 years ago by andrew.j.skelton73 6.6k
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Comment: C: Kallisto pseudobam to IGV
7.4 years ago by andrew.j.skelton73 6.6k
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8.0k
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Answer: A: Kallisto pseudobam to IGV
7.4 years ago by andrew.j.skelton73 6.6k
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2.7k
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Answer: C: GATK variantFiltration unexpected behaviour?
7.4 years ago by andrew.j.skelton73 6.6k
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Answer: A: Transcripts read count
7.4 years ago by andrew.j.skelton73 6.6k
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Comment: C: Kallisto : Compare TPM between samples from different illumina sequencers (HiSeq
7.4 years ago by andrew.j.skelton73 6.6k
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3.2k
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Comment: C: how to calling variants in RNAseq data from multiple samples?
7.4 years ago by andrew.j.skelton73 6.6k
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1
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3.2k
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Comment: C: how to calling variants in RNAseq data from multiple samples?
7.4 years ago by andrew.j.skelton73 6.6k
2
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1
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3.2k
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Answer: A: Kallisto : Compare TPM between samples from different illumina sequencers (HiSeq
7.4 years ago by andrew.j.skelton73 6.6k
1
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1
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3.2k
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Comment: C: how to calling variants in RNAseq data from multiple samples?
7.4 years ago by andrew.j.skelton73 6.6k
4
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3.2k
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Answer: A: how to calling variants in RNAseq data from multiple samples?
7.4 years ago by andrew.j.skelton73 6.6k
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1
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1.7k
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Comment: C: How to check if specific mutations are or not enriched in a RNAseq data seq?
7.4 years ago by andrew.j.skelton73 6.6k
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Answer: A: Best practises RNAseq - Sleuth vs. NA's in annotation
7.4 years ago by andrew.j.skelton73 6.6k
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Answer: A: Regarding GATK for snp analysis
7.4 years ago by andrew.j.skelton73 6.6k
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2.7k
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Answer: A: The same Illumina expression data gathered by GEOquery and direct download shows
7.5 years ago by andrew.j.skelton73 6.6k
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2.2k
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Answer: A: methylation probe numbers
7.5 years ago by andrew.j.skelton73 6.6k
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Comment: C: methylation probe numbers
7.5 years ago by andrew.j.skelton73 6.6k
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Comment: C: myGene in R using different genome assembly
7.5 years ago by andrew.j.skelton73 6.6k
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1
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1.9k
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Answer: A: myGene in R using different genome assembly
7.5 years ago by andrew.j.skelton73 6.6k
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Comment: C: What's Pathway Enrichment Analysis?
7.5 years ago by andrew.j.skelton73 6.6k
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1
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5.8k
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Comment: C: minfi pre-processing and normalization
7.5 years ago by andrew.j.skelton73 6.6k
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5.8k
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Comment: C: What's Pathway Enrichment Analysis?
7.5 years ago by andrew.j.skelton73 6.6k
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1.5k
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Comment: C: Some older questions with answers displayed as open.
7.5 years ago by andrew.j.skelton73 6.6k
5
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2
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5.8k
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Answer: A: What's Pathway Enrichment Analysis?
7.5 years ago by andrew.j.skelton73 6.6k
2
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1
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5.8k
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Answer: A: minfi pre-processing and normalization
7.5 years ago by andrew.j.skelton73 6.6k
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1
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3.6k
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Comment: C: Conflicting results with DESeq2 between versions
7.5 years ago by andrew.j.skelton73 6.6k
5
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4.7k
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Answer: C: Issues with building an index in salmon
7.5 years ago by andrew.j.skelton73 6.6k
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3.5k
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Comment: C: How to use machine learning in Fastq/Fasta data?
7.5 years ago by andrew.j.skelton73 6.6k
1
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1
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3.2k
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Answer: A: RNA-seq power analysis
7.5 years ago by andrew.j.skelton73 6.6k
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1
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1.8k
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Comment: C: Best way to link drugs to diseases prefferably using R
7.5 years ago by andrew.j.skelton73 6.6k
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1
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15k
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Comment: C: retrieve normalised count data from DESeq2
7.6 years ago by andrew.j.skelton73 6.6k
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Answer: C: Merging stringtie assemblies using stringtie merge
7.6 years ago by andrew.j.skelton73 6.6k
6
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1
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6.5k
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Answer: A: How can I only took the mapped ones from STAR ?
7.6 years ago by andrew.j.skelton73 6.6k
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1
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7.2k
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Comment: C: Warning encountered while transcript abundance estimation using stringtie
7.7 years ago by andrew.j.skelton73 6.6k
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1
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7.2k
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Comment: C: Warning encountered while transcript abundance estimation using stringtie
7.7 years ago by andrew.j.skelton73 6.6k
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1.6k
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Comment: C: how to incorporate the gene ids/in tophat query
7.7 years ago by andrew.j.skelton73 6.6k
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1
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4.6k
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Comment: C: How to get IDs of family trios in 1000 genomes project?
7.7 years ago by andrew.j.skelton73 6.6k
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3.0k
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Comment: C: how to do noob+funnorm+bmiq normalization together in minfi or RnBeads?
7.7 years ago by andrew.j.skelton73 6.6k
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2.0k
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Comment: C: How to compute global chromosome expression from RNA-Seq
7.7 years ago by andrew.j.skelton73 6.6k
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1.7k
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Comment: C: Is there any way of adjusting age in methylation 450k data?
7.7 years ago by andrew.j.skelton73 6.6k
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0
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1.1k
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Comment: C: Dendrograms production assistance
7.7 years ago by andrew.j.skelton73 6.6k
4
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2.4k
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Comment: C: Best Program to use for DE Analysis
7.7 years ago by andrew.j.skelton73 6.6k
1
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4.0k
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Comment: C: How to do differential expression of circular RNAs?
7.7 years ago by andrew.j.skelton73 6.6k
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3.6k
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Comment: C: any recommended tools for batch effect and normalization not written in R?
7.7 years ago by andrew.j.skelton73 6.6k
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2.6k
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Comment: C: installing an R package
7.7 years ago by andrew.j.skelton73 6.6k
701 results • Page 7 of 15
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