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1
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0
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630
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Python tools for gene annotation, ontology & gene set analysis
gene ontology annotation databases single-cell
2.8 years ago by PianoEntropy ▴ 70
0
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0
replies
698
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(scRNAseq) Fitting RNA splicing dynamics with scvelo gives wrong results
RNA-seq single-cell scvelo splicing
3.1 years ago by PianoEntropy ▴ 70
6
votes
2
replies
7.7k
views
Tools to generate spliced/unspliced counts
velocyto single-cell splicing RNA-seq scvelo
3.4 years ago by PianoEntropy ▴ 70
0
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0
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6.1k
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Comment: Comment: scvelo vs velocyto
3.4 years ago by PianoEntropy ▴ 70
0
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1
reply
1.3k
views
Comment: Comment: Difference between CellRanger reference genome and Ensembl/UCSC?
3.4 years ago by PianoEntropy ▴ 70
1
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3
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1.3k
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Difference between CellRanger reference genome and Ensembl/UCSC?
cellranger single-cell RNA-seq alignment
updated 3.4 years ago by 147k • written 3.4 years ago by ▴ 70
0
votes
3
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2.5k
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STARsolo --EmptyDrops_CR parameters
RNA-seq alignment STAR
updated 2.8 years ago by • 0 • written 3.4 years ago by ▴ 70
4
votes
4
replies
1.7k
views
Generate QC report for STARsolo (html)
quality RNA-seq control STAR
updated 3.4 years ago by ★ 2.2k • written 3.4 years ago by ▴ 70
0
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0
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1.7k
views
Comment: Comment: Generate QC report for STARsolo (html)
3.4 years ago by PianoEntropy ▴ 70
2
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0
replies
7.3k
views
Comment: Comment: Run STAR on .fastq files I1, R1 and R2
3.4 years ago by PianoEntropy ▴ 70
9
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2
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7.3k
views
Run STAR on .fastq files I1, R1 and R2
RNA-seq alignment STAR
3.4 years ago by PianoEntropy ▴ 70
4
votes
1
reply
1.2k
views
Cellranger alignment options / parameters
Cellranger Alignment
updated 3.5 years ago by ★ 18k • written 3.5 years ago by ▴ 70
0
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2
replies
5.4k
views
Comment: Comment: Merging FASTQ files with Cellranger
3.5 years ago by PianoEntropy ▴ 70
3
votes
8
replies
5.4k
views
6 follow
Merging FASTQ files with Cellranger
Cellranger Merging
updated 20 months ago by • 0 • written 3.5 years ago by ▴ 70
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