updated 2 days ago by
t.montserrat.ayuso
▴
40
•
written 11 days ago by
carolofharvest
▴
40
13
votes
14
replies
809
views
10
votes
16
replies
17k
views
7 follow
updated 3 days ago by
Pierre Lindenbaum
161k
•
written 5.7 years ago by
mostafarafiepour
▴
180
10
votes
3
replies
293
views
updated 2 days ago by
b.contreras.moreira
▴
180
•
written 2 days ago by
ijarne
•
0
10
votes
14
replies
662
views
6 follow
updated 2 days ago by
GenoMax
142k
•
written 8 days ago by
nicole.kavanagh
•
0
7
votes
1
reply
154
views
6
votes
6
replies
1.8k
views
5
votes
5
replies
265
views
5
votes
2
replies
89
views
updated 5 hours ago by
Gordon Smyth
★
7.1k
•
written 8 hours ago by
gBioStar5
▴
10
5
votes
5
replies
622
views
updated 6 days ago by
Mbofire
•
0
•
written 15 days ago by
Ming Tommy Tang
★
3.9k
4
votes
2
replies
245
views
updated 5 days ago by
Ram
43k
•
written 7 days ago by
carolofharvest
▴
40
4
votes
2
replies
260
views
5 days ago by
lorena9132
▴
10
4
votes
1
reply
240
views
4
votes
15
replies
1.6k
views
updated 6 days ago by
Gordon Smyth
★
7.1k
•
written 4 months ago by
raplayer
▴
10
4
votes
9
replies
2.1k
views
6 follow
4
votes
3
replies
2.2k
views
updated 23 hours ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
Lila M
★
1.2k
4
votes
2
replies
246
views
4
votes
6
replies
1.2k
views
4
votes
12
replies
4.8k
views
10 follow
4
votes
6
replies
3.8k
views
4
votes
5
replies
3.4k
views
updated 1 day ago by
DavidStreid
▴
90
•
written 6.4 years ago by
madhu.9124
▴
60
3
votes
5
replies
341
views
3
votes
3
replies
412
views
3
votes
4
replies
422
views
updated 3 days ago by
Gordon Smyth
★
7.1k
•
written 6 days ago by
SHN
▴
40
3
votes
8
replies
607
views
updated 3 days ago by
Chris Dean
▴
410
•
written 7 days ago by
sovrappensiero
▴
100
3
votes
8
replies
526
views
3
votes
3
replies
233
views
3
votes
4
replies
4.0k
views
updated 1 day ago by
chloek88
•
0
•
written 5.5 years ago by
Philipp Bayer
8.4k
3
votes
0
replies
1.1k
views
5 days ago by
Ibrahim Tanyalcin
★
1.2k
3
votes
5
replies
290
views
2
votes
12
replies
2.6k
views
6 follow
updated 2 hours ago by
Anitha
•
0
•
written 4.8 years ago by
ww22runner
▴
60
2
votes
2
replies
106
views
2
votes
3
replies
822
views
updated 5 days ago by
vjanve
•
0
•
written 7 months ago by
mateomejias
•
0
2
votes
5
replies
249
views
2
votes
2
replies
2.6k
views
2
votes
4
replies
712
views
updated 3 days ago by
Pierre Lindenbaum
161k
•
written 20 months ago by
t.ali
•
0
2
votes
2
replies
1.8k
views
updated 6 days ago by
e.r.zakiev
▴
210
•
written 3.8 years ago by
n.anuragsharma
▴
40
2
votes
3
replies
159
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
ScottDansk
▴
10
2
votes
2
replies
237
views
2
votes
2
replies
221
views
updated 6 days ago by
GenoMax
142k
•
written 6 days ago by
ahmad.sajad4541
•
0
2
votes
5
replies
2.5k
views
updated 1 day ago by
Cameron.walker9900
•
0
•
written 5.1 years ago by
Assa Yeroslaviz
★
1.8k
2
votes
4
replies
281
views
2
votes
3
replies
295
views
2
votes
2
replies
323
views
4 days ago by
drajangirija
•
0
2
votes
1
reply
306
views
updated 6 days ago by
chrchang523
10k
•
written 10 days ago by
8armed
▴
10
2
votes
2
replies
165
views
2 days ago by
Zeng Jingyu
▴
60
2
votes
1
reply
125
views
2
votes
0
replies
57
views
16 hours ago by
carlopecoraro2
★
2.5k
1
vote
1
reply
191
views
updated 5 days ago by
Ram
43k
•
written 7 days ago by
adi.gershon1
•
0
1
vote
2
replies
247
views
1
vote
1
reply
156
views
Recent Votes
Recent Locations •
All
United States, just now
Bangalore, 2 minutes ago
India, 2 minutes ago
Norway, 2 minutes ago
UK, 3 minutes ago
WCIP | Glasgow | UK, 4 minutes ago
Germany, 4 minutes ago
Recent Awards •
All
Popular Question to
melissachua90
▴
70
Popular Question to
Lila M
★
1.2k
Popular Question to
Amr
▴
160
Commentator to
rpolicastro
13k
Popular Question to
singcell
•
0
Teacher to
Gordon Smyth
★
7.1k
Popular Question to
anithanagaraj93
▴
10
Recent Replies
Comment: Truncated metadata file report from ENA Portal API
by
Giulia
•
0
The " missing is because of a copy-paste error in the post..
I know wget but my tool is entirely in python. I really don't understand why i…
Comment: UMI-Tools knee-method has great influence on the results of white list
by
Assa Yeroslaviz
★
1.8k
and if I use the command as such:
```
umi_tools extract --extract-method=regex --error-correct-cell \
--bc-pattern2='(?P…
Comment: UMI-Tools knee-method has great influence on the results of white list
by
i.sudbery
19k
No, UMI-tools won't work this out automatically, you'll need to either switch read1 and read2 or use the new `--read2-only` which is curren…
Comment: Correlation Analysis
by
manaswwm
▴
510
If your *gene_corr* data frame contains one gene instead of all genes, then the correlation would be per gene. If your *gene_corr* data fra…
Comment: UMI-Tools knee-method has great influence on the results of white list
by
Assa Yeroslaviz
★
1.8k
I think I might know my problem. The barcodes are in this case on read2 and not on read1. Does umi-tools recognise it automatically, or do …
Comment: Microbial Signal Transduction Database
by
zx8754
11k
Did you try https://mib-jouline-db.asc.ohio-state.edu/#introduction ?
>The database can also be accessed via the API. The same API points …
Answer: CNVKIT - unable to produce scatter and diagram pdfs
by
Anitha
•
0
Thank you for the information.
Comment: LncRNA Nomenclature
by
jain72744
▴
10
My data is based on gene counts and the respective gene IDs are given so I should work with ENSGs?
lncRNA_transcripts <- getBM(attributes …
Answer: DESeq2 error
by
ATpoint
82k
At least one group needs replication. That is the short answer. For a longer answer add details on experimental design.
Comment: When should I use R-MarkDown over R-Script ?
by
ATpoint
82k
Why particular question?
Rmarkdown is a composite of markdown and code. You can nicely separate free text, explanation, comments etc. from…
Comment: LncRNA Nomenclature
by
ATpoint
82k
RNA-seq is typically analyzed on gene rather than transcript level. Are your counts gene or transcript?
Comment: EdgeR - relationship between logFC and coefficients
by
gBioStar5
▴
10
Thanks a lot, this was very helpful. I'll keep that in mind.
Answer: EdgeR - relationship between logFC and coefficients
by
Gordon Smyth
★
7.1k
Results presented by topTags() are on the log2 scale. Coefficients stored internally in the DGELRT object are on the loge scale. If you con…
Answer: Importing a fastq file
by
size_t
▴
120
run command `explorer.exe .` in wsl terminal, and then drag file to folder
Comment: Contig assembly task, errors
by
Philipp Bayer
8.4k
Hi Ricardo! CAP3 is an 'older' overlap assembler from 1999 which is perfectly suited for these kinds of 'small' tasks. I used it last in my…
Traffic: 2282 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6