updated 9 hours ago by
Anitha
•
0
•
written 4.8 years ago by
ww22runner
▴
60
2
votes
13
replies
2.8k
views
6 follow
0
votes
11
replies
459
views
20 hours ago by
Tuck898
•
0
0
votes
7
replies
393
views
updated 7 hours ago by
Mohamed Abderrahmane
▴
20
•
written 14 days ago by
matteo.levorato
•
0
6
votes
7
replies
318
views
20 hours ago by
sansan_96
▴
90
4
votes
6
replies
369
views
updated 2 hours ago by
Matthias Zepper
4.6k
•
written 5 days ago by
prifa
▴
10
0
votes
6
replies
356
views
updated 22 hours ago by
Pierre Lindenbaum
161k
•
written 2 days ago by
ajbarrett98
•
0
3
votes
6
replies
456
views
0
votes
5
replies
295
views
12 hours ago by
feather-W
•
0
2
votes
5
replies
494
views
0
votes
5
replies
288
views
2 hours ago by
SilhouetteQ
•
0
2
votes
4
replies
5.6k
views
updated 1 hour ago by
Thind amarinder
▴
340
•
written 4.9 years ago by
garbuzov
▴
70
0
votes
4
replies
336
views
2
votes
3
replies
218
views
0
votes
3
replies
88
views
2
votes
3
replies
174
views
0
votes
2
replies
17
views
just now by
trkfs
•
0
2
votes
2
replies
230
views
2 hours ago by
Christopher
•
0
0
votes
2
replies
212
views
updated 17 hours ago by
Zhenyu Zhang
★
1.2k
•
written 4 days ago by
elisheva
▴
120
0
votes
2
replies
165
views
updated 6 hours ago by
colindaven
6.4k
•
written 1 day ago by
ramendra.sarma
•
0
1
vote
2
replies
102
views
updated 6 hours ago by
ATpoint
82k
•
written 7 hours ago by
jennyp0706
•
0
1
vote
2
replies
281
views
updated 24 minutes ago by
Ram
43k
•
written 1 day ago by
t.fortunato.asquini
•
0
0
votes
2
replies
283
views
updated 17 hours ago by
Zhenyu Zhang
★
1.2k
•
written 10 days ago by
yahn
•
0
0
votes
2
replies
197
views
0
votes
1
reply
73
views
0
votes
1
reply
194
views
updated 17 hours ago by
Zhenyu Zhang
★
1.2k
•
written 3 days ago by
jain72744
▴
10
0
votes
1
reply
148
views
0
votes
1
reply
195
views
updated 7 hours ago by
Zeng Jingyu
▴
60
•
written 3 days ago by
Nikki
•
0
0
votes
1
reply
111
views
updated 7 hours ago by
Philipp Bayer
8.4k
•
written 23 hours ago by
samRayne
•
0
1
vote
1
reply
147
views
0
votes
1
reply
300
views
updated 4 hours ago by
aw7
▴
280
•
written 23 days ago by
abhishekghadge
•
0
0
votes
1
reply
147
views
0
votes
1
reply
46
views
1
vote
1
reply
54
views
0
votes
1
reply
14
views
updated 10 minutes ago by
bk11
★
2.4k
•
written 19 minutes ago by
kilcdincer
▴
10
0
votes
0
replies
27
views
0
votes
0
replies
23
views
0
votes
0
replies
45
views
0
votes
0
replies
39
views
0
votes
0
replies
35
views
updated 3 hours ago by
colindaven
6.4k
•
written 3 hours ago by
Ghada
•
0
0
votes
0
replies
48
views
2 hours ago by
Lukas
•
0
Recent Votes
Recent Locations •
All
Colombia/Bogotá, just now
Colombia, 1 minute ago
United States, 1 minute ago
Tunisia, 2 minutes ago
Brazil, 3 minutes ago
United States, 4 minutes ago
India, 5 minutes ago
Recent Awards •
All
Popular Question to
Sara
▴
30
Popular Question to
anasjamshed
▴
120
Popular Question to
pablo
▴
300
Scholar to
Bastien Hervé
5.3k
Popular Question to
rj.rezwan
•
0
Scholar to
colindaven
6.4k
Recent Replies
Answer: Splitting Seurat object by sample layers
by
bk11
★
2.4k
You can do the following-
Idents(SeuratObj) <- "orig.ident"
control_set <- subset(SeuratObj, idents = c("counts.control","data.…
Comment: Galaxy StringTie error
by
GenoMax
142k
> I have sent a bug report to the Galaxy administrator
If you have not done so please post this in Galaxy help forum for directed help: h…
Comment: 44% Successfully Assigned Fragments with featureCounts after 85% uniquely mapped
by
Thind amarinder
▴
340
Wondering, if it was total RNAseq data? or ployA
Comment: RNA seq analysis
by
Matthias Zepper
4.6k
It is still obscure to me how many different tissues you would like to include into your comparison and what your intended design is.
To …
Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
by
Juke34
8.6k
You can get a look here https://www.biostars.org/p/9465973/
Answer: Mouse ribosome sequences in fasta format
by
GenoMax
142k
A version of the mouse rDNA repeat can be found here: https://www.ncbi.nlm.nih.gov/nuccore/BK000964
Use the dropdown menu at top-left t…
Comment: Kraken2 database
by
Christopher
•
0
Hello, Mathew.
Firstly, thank you for answering my question.
**Sorry, what analysis are you trying to perform with these databases?**
I a…
Comment: Benchmarking RNASeq Variant Calling Pipeline (Short Reads)
by
GenoMax
142k
As long as it is the same GIAB sample you could compare your SNP with the SNP's available for the whole genome set.
Comment: Single-cell RNA-seq FindMarker and EnhancedVolcano Plot: most genes are low -log
by
yau
•
0
Dear Mensur,
Thanks so much for your reply!!
In my case, I got 1 control(healthy) and 2 disease mouse Single cell RNA-sew data, so I …
Comment: BWA alignment
by
ATpoint
82k
The relevant code line is precisely the same as in the question.
Answer: imputation through beagle
by
dthorbur
★
1.9k
Building a reference panel from the samples you intend to impute seems like a very circular approach. Plus, GBS is a reduced representation…
Answer: Single-cell RNA-seq FindMarker and EnhancedVolcano Plot: most genes are low -log
by
Mensur Dlakic
★
27k
You seem to have too stringent of a p-value cutoff (1e-5). Hopefully you get the concept of how the interplay of `-log10P-value` and `log2F…
Comment: Single-cell RNA-seq FindMarker and EnhancedVolcano Plot: most genes are low -log
by
yau
•
0
![enter image description here][1]
[1]: /media/images/7199a665-b13a-40c8-a065-313cf2b7
Answer: Using samtools with GCS (google cloud storage) on a docker container seems to gi
by
aw7
▴
280
This is a bit late, but the first thing to go is to run `samtools --version` and make sure the docker samtools is configured with the the G…
Answer: Long reads and fixing of mate-pair issues/marking duplicates with samtools
by
aw7
▴
280
I do not think `samtools fixmate` and `markdup` are going to work on PacBio long reads. `fixmate` is for setting and repairing mate inform…
Traffic: 3040 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6