updated 5 days ago by
Pierre Lindenbaum
161k
•
written 5 days ago by
biology_inform
▴
50
1
vote
5
replies
231
views
1
vote
3
replies
299
views
updated 5 days ago by
jared.andrews07
★
16k
•
written 5 days ago by
jen
▴
10
1
vote
5
replies
811
views
written 6 months ago by
Daniel
▴
30
1
vote
3
replies
211
views
updated 5 days ago by
Zhenyu Zhang
★
1.2k
•
written 5 days ago by
shpak.max
▴
50
1
vote
4
replies
300
views
1
vote
2
replies
236
views
1
vote
1
reply
250
views
4 days ago by
ramiro.barrantes
•
0
1
vote
4
replies
301
views
1
vote
5
replies
274
views
4 days ago by
kl
▴
10
1
vote
1
reply
218
views
1
vote
2
replies
236
views
1
vote
3
replies
284
views
1
vote
3
replies
806
views
updated 4 days ago by
sansan_96
▴
90
•
written 2.7 years ago by
boymin2020
▴
80
1
vote
1
reply
192
views
updated 3 days ago by
Jordan M Eizenga
▴
460
•
written 14 days ago by
sarumonsus
▴
10
1
vote
0
replies
167
views
updated 3 days ago by
Ram
43k
•
written 4 days ago by
carlopecoraro2
★
2.5k
1
vote
5
replies
324
views
updated 3 days ago by
Ram
43k
•
written 4 days ago by
manuelmourato25
•
0
1
vote
1
reply
197
views
1
vote
3
replies
289
views
1
vote
1
reply
202
views
updated 3 days ago by
Nyksubuz
▴
20
•
written 4 days ago by
mirwa.zidi93
•
0
1
vote
5
replies
373
views
1
vote
8
replies
477
views
updated 2 days ago by
Alex Reynolds
35k
•
written 6 days ago by
ntsopoul
▴
60
1
vote
4
replies
345
views
1
vote
16
replies
756
views
updated 2 days ago by
GenoMax
142k
•
written 5 days ago by
hophuquy0944
•
0
1
vote
1
reply
202
views
1
vote
1
reply
319
views
1
vote
2
replies
703
views
updated 1 day ago by
Muhammad
•
0
•
written 2.6 years ago by
mari.johnson
•
0
1
vote
6
replies
1.5k
views
updated 1 day ago by
scideas
▴
30
•
written 8 months ago by
rohitsatyam102
▴
870
1
vote
2
replies
327
views
updated 22 hours ago by
Tommaso
•
0
•
written 3 months ago by
pt.taklifi
▴
60
1
vote
0
replies
81
views
19 hours ago by
Dr.
•
0
1
vote
7
replies
360
views
updated 9 hours ago by
marco.barr
▴
130
•
written 1 day ago by
Ghada
•
0
1
vote
3
replies
277
views
1
vote
1
reply
48
views
1
vote
2
replies
132
views
1
vote
4
replies
44
views
0
votes
1
reply
149
views
updated 6 days ago by
LauferVA
4.2k
•
written 6 days ago by
graeme.thorn
▴
100
0
votes
0
replies
49
views
0
votes
1
reply
155
views
0
votes
0
replies
115
views
6 days ago by
jennyp0706
•
0
0
votes
3
replies
225
views
0
votes
0
replies
153
views
0
votes
2
replies
109
views
0
votes
4
replies
205
views
updated 8 hours ago by
Matthias Zepper
4.6k
•
written 18 hours ago by
sooni
▴
20
0
votes
0
replies
160
views
0
votes
3
replies
206
views
updated 6 hours ago by
GenoMax
142k
•
written 1 day ago by
KHURRAM SHAHZAD
•
0
0
votes
0
replies
158
views
4 days ago by
sainavyav22
•
0
0
votes
1
reply
85
views
updated 6 hours ago by
marco.barr
▴
130
•
written 9 hours ago by
sooni
▴
20
0
votes
1
reply
68
views
0
votes
3
replies
215
views
0
votes
1
reply
557
views
updated 5 hours ago by
fu_entomology
▴
40
•
written 8 months ago by
juliviglino
•
0
0
votes
0
replies
38
views
Recent Votes
Recent Locations •
All
United States, just now
United States, 4 minutes ago
France, 4 minutes ago
United States, 4 minutes ago
United States, 7 minutes ago
United States, 10 minutes ago
United States, 10 minutes ago
Recent Awards •
All
Popular Question to
tothepoint
▴
800
Popular Question to
safeassli
▴
10
Popular Question to
curious
▴
750
Popular Question to
manaswwm
▴
510
Popular Question to
Raghad
•
0
Scholar to
Pierre Lindenbaum
161k
Recent Replies
Comment: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
by
GenoMax
142k
For those samples it appears that raw data was not submitted. Just an assembly.
$ esearch -db biosample -query SAMN08009548 | elink -…
Comment: How can I calculate the OS of each patient?
by
Pedro
•
0
**I have already tried this code.
listSamples with HNSC cancer and smokers.
I need at least one supporting material to find out the survi…
Comment: Filter Genome for Specific Sites
by
Anita
•
0
This is unhelpful and doesn't answer my question.
Comment: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
by
Harshita
•
0
It seems that the authors in this paper have used paired-end sequences only for their analysis, and for that, they would also have used the…
Comment: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
by
Harshita
•
0
Thank you so much for helping me out in this!
I have used most of the sequences that are found in this table. But, some samples like the…
Answer: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
by
GenoMax
142k
Looks like the samples are from this project: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA320483&o=acc_s%3Aa
This table has the SR…
Comment: Filter Genome for Specific Sites
by
Pierre Lindenbaum
161k
> My sites are in an Excel file right now
![enter image description here][1]
<!-- was an American educator and academic administrator…
Answer: Filter Genome for Specific Sites
by
GenoMax
142k
> I have a list of ~1,300 single bp sites
Convert your file to plain text [**BED format**][1] (three fields required).
Use `bedtools slo…
Comment: How to generate an Upset plot in R to plot the shared variants between cell free
by
sainavyav22
•
0
It worked, Thank you very much!
Comment: What marks a De-Novo Genome assembly as FAILED?
by
dthorbur
★
2.0k
I'm unsure you'll be able to identify whole chromosomes that are not core from illumina reads alone. That might be easier to do with a micr…
Comment: Error in using BioSampleParser tool: subscript out of bounds
by
Mohamed Samir
▴
20
Dear marco,
We need to ask ourselves why it is not working for all bioprojects ? I have looked into this, and observed that as long as the…
Comment: Why most genes have high padj values
by
Ram
43k
You ***want*** ~3000 DE genes?<a href="" title="Text added because biostars parser needs it"></a>
Answer: Generating Group/Cluster Lists from fastq files
by
GenoMax
142k
> I was hoping to just do this in galaxy
This is not a galaxy option but `clumpify.sh ` from BBMap suite can cluster sequences/dedupe th…
Comment: Practical Haplotype Graph v2 not finding correct paths
by
beantkapoor16
▴
10
Hello, just wanted to check in if the code has been fixed yet? Thank you.
Traffic: 2190 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6