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6 days ago by
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21 days ago by
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Comment: Filter Genome for Specific Sites
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Pierre Lindenbaum
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> My sites are in an Excel file right now
![enter image description here][1]
<!-- was an American educator and academic administrator…
Comment: Filter Genome for Specific Sites
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GenoMax
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> I have a list of ~1,300 single bp sites
Convert your file to plain text [**BED format**][1] (three fields required).
Use `bedtools slo…
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sainavyav22
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It worked, Thank you very much!
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I'm unsure you'll be able to identify whole chromosomes that are not core from illumina reads alone. That might be easier to do with a micr…
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Dear marco,
We need to ask ourselves why it is not working for all bioprojects ? I have looked into this, and observed that as long as the…
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You ***want*** ~3000 DE genes?<a href="" title="Text added because biostars parser needs it"></a>
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Hello, just wanted to check in if the code has been fixed yet? Thank you.
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Based on the [source code](https://bitbucket.org/young_computation/rose/src/feb35cb1d9556a76f8ac1f51521539bb30651343/ROSE_utils.py?at=maste…
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They're not addressing the actual question, just saying something tangentially related. It looks like their understanding of both consensus…
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Hello, i encountered this problem when running ROSE, Do anyone know how to solve it?
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We have been using SeSAMe, it works well for the most part. They have an enrichment tool called KnowYourCG. You can check it out their vign…
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I think you have set a filter to get these pahways upstream from the DEG results. You should extract the IDs or names of the genes that you…
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