updated 1 day ago by
GenoMax
142k
•
written 4 days ago by
hophuquy0944
•
0
1
vote
16
replies
744
views
1
vote
14
replies
2.5k
views
updated 17 days ago by
GenoMax
142k
•
written 4.5 years ago by
Swimming bird
▴
20
0
votes
11
replies
721
views
0
votes
10
replies
642
views
0
votes
9
replies
2.6k
views
6 follow
4
votes
9
replies
2.1k
views
20 days ago by
anna
▴
20
0
votes
9
replies
1.5k
views
2
votes
9
replies
1.1k
views
6 hours ago by
LauferVA
4.2k
1
vote
9
replies
434
views
updated 9 days ago by
i.sudbery
19k
•
written 12 days ago by
Assa Yeroslaviz
★
1.8k
2
votes
9
replies
944
views
0
votes
9
replies
606
views
3 days ago by
Arton
▴
10
3
votes
8
replies
636
views
3
votes
8
replies
6.6k
views
7 follow
updated 17 days ago by
Sd
•
0
•
written 5.1 years ago by
Nicolas Rosewick
11k
0
votes
8
replies
474
views
1
vote
8
replies
559
views
19 days ago by
marco.barr
▴
130
1
vote
7
replies
574
views
10 days ago by
deepak
•
0
5
votes
7
replies
505
views
3
votes
7
replies
422
views
4
votes
6
replies
3.8k
views
0
votes
6
replies
503
views
1
vote
6
replies
418
views
0
votes
6
replies
327
views
1
vote
6
replies
2.8k
views
updated 20 days ago by
dimpleadiwal050896
•
0
•
written 5.0 years ago by
ggman
▴
90
0
votes
6
replies
493
views
0
votes
5
replies
329
views
6 days ago by
SilhouetteQ
•
0
2
votes
5
replies
547
views
2
votes
5
replies
958
views
3
votes
5
replies
352
views
0
votes
5
replies
468
views
updated 22 days ago by
Istvan Albert
100k
•
written 25 days ago by
sehriban.buyukkilic
▴
10
5
votes
5
replies
345
views
0
votes
5
replies
434
views
0
votes
5
replies
300
views
0
votes
5
replies
6.0k
views
updated 29 days ago by
ndm1096
•
0
•
written 6.5 years ago by
ac.research
▴
30
0
votes
5
replies
446
views
updated 24 days ago by
GenoMax
142k
•
written 25 days ago by
Bertalan_Takacs
▴
90
0
votes
5
replies
436
views
0
votes
5
replies
288
views
2
votes
5
replies
792
views
1
vote
5
replies
341
views
1
vote
4
replies
353
views
3
votes
4
replies
331
views
0
votes
4
replies
428
views
12 days ago by
carolofharvest
▴
40
0
votes
4
replies
319
views
8 days ago by
Researcher
▴
30
0
votes
4
replies
283
views
1 day ago by
mavy
▴
10
1
vote
4
replies
322
views
2
votes
4
replies
387
views
3
votes
4
replies
4.0k
views
updated 11 days ago by
chloek88
•
0
•
written 5.6 years ago by
Philipp Bayer
8.5k
0
votes
4
replies
263
views
1
vote
4
replies
507
views
1
vote
4
replies
421
views
updated 9 days ago by
GenoMax
142k
•
written 4 weeks ago by
aniigodwinn
•
0
0
votes
4
replies
309
views
Recent Votes
Recent Locations •
All
United States, just now
Russia, 5 minutes ago
India, 5 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 8 minutes ago
Morocco, 11 minutes ago
UK, 16 minutes ago
United States, 16 minutes ago
Recent Awards •
All
Scholar to
Pierre Lindenbaum
161k
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
scideas
▴
30
Popular Question to
Muhammad
•
0
Popular Question to
synat.keam
▴
100
Recent Replies
Comment: Add stats to the plot
by
GenoMax
142k
Please use `101010` to format `code` so it is represented in monospace font. I have done this for you now.
Answer: is there a tool to recover corrupted fastq files
by
Tommaso
•
0
You may also want to give a try to **FastqWiper** (https://github.com/mazzalab/fastqwiper)
Comment: Add stats to the plot
by
Ghada
•
0
Thanks. That helpful.
I am getting this error
data4_test <- data4.ts%>% ungroup() %>% t.test(data =.,value ~ Condition)%>%
+ …
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot comment here. You are asking why results between two experiments are different. I do not know without seeing the data.
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
Bibi
•
0
Thank you so much for this insight. I just want to clarify another point here. I have used scRNA seq data from mice mammary epithelial cell…
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
> Cannot read non-existent file: file:///local/home/User/VCF_Filtering/biostar.code
your file doesn't exist, is at the wrong place etc.
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
ajbarrett98
•
0
Hi Pierre,
I am attempting to run this code and am running into this error:
(jvar) $ jvarkit vcffilterjdk -f biostar.code Dart_VCF2_Or…
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot give a precise answer, as ML is not my field, but generally, why don't you apply the method to pseudobulks of the exact single-cel…
Answer: geom_bar issue in ggplot2 with xlim()
by
ATpoint
82k
https://stackoverflow.com/questions/10365167/geom-bar-bars-not-displaying-when-specifying-ylim
Comment: What marks a De-Novo Genome assembly as FAILED?
by
Umer
▴
50
Yes. We are sequencing 45 different samples with illumina.
12 of these are also going to be sequenced with Nanopore (for hybrid assembly). …
Comment: HGVS Nomenclature of Multiple Indels found in Cis
by
LauferVA
4.2k
how has this code progressed? is it publically available? would you want to work together?
Comment: Design for complex RNA-Seq experiment using Deseq2
by
Ezequiel
•
0
I completely agree with most points. The PCA shows that the biggest driver of difference is the patients themselves, with PRE and POST time…
Comment: Add stats to the plot
by
marco.barr
▴
130
Hi, you can add statistical annotations using `ggpubr` function `stat_pvalue_manual `. You need to make sure you calculate the p-values fir…
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
ATpoint
82k
Use everything before the whitespace in list.txt, for example `A00869:294:HCW57DSXY:2:1101:3929:1000` and not `A00869:294:HCW57DSXY:2:1101:…
Answer: CellRanger output more cells than specified using --force-cells? Why?
by
scideas
▴
30
I actually had this same issue with CellRanger v7- turns out that since you have 2 species in your mapping reference, CellRanger is forcing…
Traffic: 1234 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6