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News: The 2024 Canadian Bioinformatics Workshops are here!
CBW workshop training
9 weeks ago by bioinformatics.ca • 0
0
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0
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185
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News: Live online course Data Manipulation with R Tidyverse, 3 and 5 of April
R manipulation tidyverse data
10 weeks ago by Sole • 0
0
votes
0
replies
211
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News: Online course: Reproducibility in Bioinformatics
Docker Singularity WorkflowManagementSystems Reproducibility
10 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
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267
views
News: Online course: Genome Assembly Using Oxford Nanopore Sequencing - 4 seats remaining
GenomeAssembly Nanopore longreads
10 weeks ago by carlopecoraro2 ★ 2.5k
0
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0
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244
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News: Webinar about scRNA-seq cell type prediction
scRNAseq
updated 10 weeks ago by 142k • written 10 weeks ago by • 0
0
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0
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263
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News: Online course: Spatial Omics in R/Bioconductor
R Spatial-Omics Bioconductor tidyverse transcriptomics
updated 11 weeks ago by 43k • written 11 weeks ago by ★ 2.5k
0
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0
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221
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News: Online course: Model-Based Demographic Inference from Population Genomics
Demographic-Inference Population-Genomics Demographic-Models
updated 11 weeks ago by 43k • written 11 weeks ago by ★ 2.5k
0
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0
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199
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News: Online course: R/Bioconductor for Mass Spectrometry and Proteomics
R Proteomics Bioconductor Mass-Spectrometry
updated 12 weeks ago by 43k • written 12 weeks ago by ★ 2.5k
0
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0
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203
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News: Virtual Workshops with the UConn Computational Biology Core
Workshop genomics
updated 12 weeks ago by 142k • written 12 weeks ago by ▴ 10
0
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0
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189
views
News: NGS Data Analysis Courses for Absolute Beginners
NGS DNAseq RNAseq singlecellsequencing DataAnalysis
12 weeks ago by David Langenberger 11k
0
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0
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205
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News: Online course: Genome Assembly and Annotation
Annotation Genome-Assembly Nanopore Pacbio
updated 12 weeks ago by 43k • written 12 weeks ago by ★ 2.5k
0
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0
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192
views
News: Online course: Computation Tumor Evolution
R Cancer-Genomics Tumor-Evolution Genomics
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
0
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0
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188
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News: Course live online Intro Bayesian Analyses, March 4-8, 2024
R python bayesian
3 months ago by Sole • 0
0
votes
1
reply
967
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News: FINAL CALL: RNA-Seq Data Analysis Workshop (March 11 - 14, 2024 in Berlin, Germany)
NGS RNA-Seq Workshop
3 months ago by David Langenberger 11k
0
votes
0
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236
views
News: Online course : Meta-Analysis in R
R Meta-Analysis Statistics
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
1
vote
0
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199
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News: Cellosaurus release 48 is available
cell-line biocuration cellosaurus knowledgebase
3 months ago by Amos Bairoch ▴ 120
0
votes
0
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238
views
News: Online course: Genome Assembly Using Oxford Nanopore Sequencing
Genome-Assembly Nanopore
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
0
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0
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258
views
News: BLAST FASTA Files Will No Longer Be Available on the FTP Site Effective April 2024
NCBI BLAST
3 months ago by PeterC_NCBI ▴ 410
0
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0
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244
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News: EMBL-EBI Training | Systems biology: from large datasets to biological insight
systems
3 months ago by EMBL Events ▴ 10
0
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0
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210
views
News: Online course - Sex Chromosome Evolution
Evolution Genomics Sex-Chromosome
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
0
votes
1
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821
views
News: LAST CALL: Online Course - A Practical Introduction to NGS Data Analysis (February 28 - March 1, 2024)
NGS Online-Workshop
updated 3 months ago by 43k • written 3 months ago by 11k
7
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2
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1.2k
views
News: NGS Data Analysis Workshops 2024
scRNA-seq dna-seq rna-seq nextflow
3 months ago by David Langenberger 11k
0
votes
0
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242
views
News: Online course: Generalized Additive Models (GAMs) in R
R Statistics Gams
3 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
271
views
News: Online course - Introduction to Python for biologists
Python Programming NGSData
3 months ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
208
views
News: Online course - Introduction to Machine Learning in R for omics data
R Omics MachineLearning StatisticalLearning
3 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
203
views
News: Online course - Flow cytometry data analysis with R/Bioconductor
R Flow-Cytometry Bioconductor
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
0
votes
1
reply
329
views
News: Reminder: NCBI ClinVar XML update to accommodate somatic variants coming Jan 29, 2024
SNP XML ClinVar NCBI
4 months ago by PeterC_NCBI ▴ 410
4
votes
0
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212
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News: Transform Your Research with Our NGS Data Analysis Online Course!
DNAseq NGS Biologists OnlineCourse RNAseq
4 months ago by David Langenberger 11k
0
votes
0
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258
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News: 3rd edition of the Winter School in Bioinformatics - Online February 26 - March 1
genomics reproducibility phylogenomics transcriptomics
4 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
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582
views
News: course - Reproducibility in Bioinformatics
Docker Reproducibility
written 13 months ago by ★ 2.5k
0
votes
1
reply
390
views
News: Online Course - Genomic Prediction
Genomic-Prediction Selective-Breeding
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
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284
views
News: Flow cytometry data analysis with R/Bioconductor course
FlowCytometry R Bioconductor
4 months ago by carlopecoraro2 ★ 2.5k
2
votes
2
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534
views
News: Unix and Shell Scripting for Bioinformatics course
Bash Unix Shell-Scripting
4 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
329
views
News: Bayesian Data Analysis in R course
R Bayesian-Statistics
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
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337
views
News: Practical Hands-On Introduction to R course
R Tidyverse Data-Analysis
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
replies
302
views
News: Landscape Genomics course at the EPFL in Lausanne, Switzerland
genomics Landscape-Genomics
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
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292
views
News: New version of ElasticBLAST (1.2.0) available from NCBI
ElasticBLAST NCBI BLAST
5 months ago by PeterC_NCBI ▴ 410
0
votes
0
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285
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News: Course. - Gene Set Enrichment Analysis in R/Bioconductor - ONLINE, 22-25 January
R Gene-Set-Enrichment-Analysis GSEA Bioconductor
updated 4 months ago by 43k • written 5 months ago by ★ 2.5k
0
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0
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298
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News: University of Connecticut Single Cell RNA-seq Workshop December 12-15, 2023
expression singlecell rnaseq
5 months ago by mia.nahom ▴ 10
0
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0
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280
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News: Online course: Introduction to Python, February 12th-March 11th, 2024
python courses
5 months ago by Sole • 0
0
votes
1
reply
382
views
News: Course: Genome Assembly and Annotation
Biodiversity Genome-Assembly Genome-Annotation Long-reads
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
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357
views
News: GWAS course
R GWAS
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
3
votes
0
replies
307
views
News: NCBI BLAST+ 2.2.15 now available for download
NCBI Taxonomy BLAST
5 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
313
views
News: Course - Introduction to R Shiny
R Data-Visualisation Shiny
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
replies
282
views
News: Online expert taught RNA-Seq workshop
workshop
5 months ago by fturner ▴ 10
0
votes
0
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327
views
News: Course - RNAseq in non-model organisms
Pacbio RNA-seq Nanopore
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
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341
views
News: Next-Generation Sequencing Data Analysis: A Practical Introduction (Nov 29 – Dec 1 in Munich, Germany)
RNAseq DNAseq NGS Workshop
5 months ago by Lars ★ 1.0k
0
votes
0
replies
328
views
News: Course - Computational Tumor Evolution
Tumor-Evolution Cancer-Genomics
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
3
replies
1.4k
views
News: :: FINAL CALL :: A Practical Introduction to NGS Data Analysis (Nov 29 - Dec 1, 2023 in Munich, Germany) - only 2 seats left
DNA-Seq NGS RNA-Seq Workshop
5 months ago by David Langenberger 11k
0
votes
0
replies
364
views
News: Course: Genome Assembly using Oxford Nanopore Sequencing
Genome-Assembly Nanopore
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
1,000 results • Page 2 of 20
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Answer: How can I analyze normalized expression data?
Answer: How can I analyze normalized expression data?
Answer: Pruning Phylogenetic Trees and Bootstrap Values
Difference between Pysam Pileup and Fetch
Answer: Where can I download some example BAM files?
Comment: Where can I download some example BAM files?
Where can I download some example BAM files?
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Recent Replies
Comment: How can I analyze normalized expression data? by mnx0723 • 0
thank you for comment
Comment: Pruning Phylogenetic Trees and Bootstrap Values by Zeng Hao ▴ 40
Dear Klaus, Thank you for the reply. If I could clarify with an example: With this tree, B0----------------- A -| B1----------…
Answer: Contig assembly task, errors by Philipp Bayer 8.4k
Feels a bit strange for an aptitude test, feels more like homework. 1) seems OK to me, just chuck them into CAP3 and see what falls out.…
Comment: Help with Biopython for Beginner by Pierre Lindenbaum 161k
> Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the c…
Answer: bcftools - reducing to "sites-only"? by Pierre Lindenbaum 161k
bcftools view -G in.vcf.gz <!-- Diabetic foot ulceration (DFU) is a devastating complication of diabetes whose pathogenesis rema…
Comment: Filtering Multi-sample VCF file for all except one Genotype by schmince • 0
I probably got some of the vocabulary wrong. I thought that "Dom HOR2932 HOR3036 HOR3726 KWSBambina Rec S42IL_124" were representing my ge…
Comment: featureCounts output assigned value higher than and HISAT2 mapping. by Ram 43k
It's featureCount**s**, not featureCount. I've edited your post and fixed all mentions of featureCounts.
Comment: kinannote software installation problems by Emanoelle • 0
Hey, I know it's been 5 years but I have the same issue. When I run the test the software is unable to perform and always deliver the follo…
Comment: STAR aligner error by Ram 43k
If they can't help you, we probably can't do much either. But we can optimize your STAR command. BAM SortedByCoordinate is the worst settin…
Answer: Obtaining Infinium Methylation450K manifest for hg38 by marco.barr ▴ 90
Hi, you can check it from github here: [https://zwdzwd.github.io/InfiniumAnnotation][1]. I don't know if this is what you are looking fo…
Comment: RNA seq analysis by ATpoint 82k
It makes absolutely no sense to conduct such an analysis. I strongly discourage you to even start with it. Results will be utterly nonsense…
Comment: Differentail gene expression results by swbarnes2 14k
Cross-posted: https://support.bioconductor.org/p/9158194/
Answer: Seurat V5 integration by Bastien Hervé 5.3k
It will depend on your context and question. I guess you will want to compare gene expression between your conditions within cell types …
Answer: Error in plotting PCA plot in seurat by Adam ▴ 30
You get this error when you try to compare two data frames that have different dimensions. Try using the traceback() command to figure out …
Comment: Applying the metacell2 algorithm using python by Wayne ★ 2.0k
Sorry, this was supposed to be a comment appended to the chain above. I didn't mean to post as an answer.
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