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2
votes
2
replies
311
views
DepMap: siRNA and CRSIPR discrepancy
DepMap
updated 5 weeks ago by 82k • written 5 weeks ago by ★ 9.4k
0
votes
2
replies
263
views
Uniprotkb's Disease & Variants section out-of-date
Uniprotkb
updated 6 weeks ago by ★ 2.4k • written 6 weeks ago by ★ 9.4k
1
vote
3
replies
283
views
R/python script to extract Subcellular locations (Compartments) from Genecards?
Genecards
updated 6 weeks ago by 161k • written 6 weeks ago by ★ 9.4k
1
vote
1
reply
211
views
R/Python script to collect allele frequency for batch of SNPs in gnomAD database
gnomAD
6 weeks ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
121
views
R/Python function to retrieve interacted proteins from HPA database
HPA
6 weeks ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
252
views
Data table for LOEUF loss-of-function observed/expected upper bound fraction
LOEUF
updated 6 weeks ago by 161k • written 7 weeks ago by ★ 9.4k
0
votes
1
reply
326
views
Tissue specific mRNA expression dataset in human and mouse
tissue-specificity
updated 7 weeks ago by 43k • written 7 weeks ago by ★ 9.4k
1
vote
0
replies
200
views
Synthetic lethality and cancer database
interaction lethal synthetic
7 weeks ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
129
views
Public datasets for genome-wide level mRNA-protein correlation calculation?
correlation protein mRNA
5 weeks ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
259
views
Disease Prevalence Database/Disease Incidence Database
prevalence
updated 8 weeks ago by 43k • written 8 weeks ago by ★ 9.4k
0
votes
0
replies
193
views
Computational Package to engage Type 2 Diabetes Knowledge Portal (T2DKP)
workflow Package
9 weeks ago by Shicheng Guo ★ 9.4k
1
vote
3
replies
405
views
Mathematical/Statistical models to predict mRNA half-life
mRNA half-life
updated 9 weeks ago by 19k • written 9 weeks ago by ★ 9.4k
3
votes
4
replies
374
views
Receptors with internalization capability
receptor
9 weeks ago by Shicheng Guo ★ 9.4k
1
vote
2
replies
461
views
Where to download excel file to include major human disease, prevalence and incidence?
Disease-Burden
updated 5 months ago by 43k • written 5 months ago by ★ 9.4k
0
votes
4
replies
5.2k
views
6 follow
rsq Filter in Michigan imputation Server
rsq michigan
updated 9 months ago by • 0 • written 4.7 years ago by ★ 9.4k
6
votes
3
replies
15k
views
fastq-dump split-spot and skip-technical
fastq-dump split-spot skip-technical
updated 15 months ago by • 0 • written 8.2 years ago by ★ 9.4k
0
votes
0
replies
352
views
The best MHC class II epitope prediction approach
epitope
20 months ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
375
views
Best Performance Monitor for Linux compared with nmon ?
nmon
20 months ago by Shicheng Guo ★ 9.4k
1
vote
0
replies
371
views
Method/approach/algorithm for multi-omics integrative analysis for mechanism insights
integrative gwas omics insights
23 months ago by Shicheng Guo ★ 9.4k
1
vote
1
reply
547
views
Large-scale public data for cancer cell line genomic data (SNP, mutation or CNV)
snp
updated 23 months ago by 4.6k • written 23 months ago by ★ 9.4k
0
votes
0
replies
512
views
Model to predict the mutation effect to COVID19 transmissibility
transmissibility covid
23 months ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
564
views
Downstream validation to differential alternative splicing analysis from RNA-seq
splicing differential
updated 23 months ago by 13k • written 24 months ago by ★ 9.4k
3
votes
1
reply
562
views
Server Vendors to provide bioinformatics talents
vendor
updated 2.0 years ago by 142k • written 2.0 years ago by ★ 9.4k
5
votes
3
replies
1.0k
views
"moving average" function for "coverage" signal in bed files?
bedtools
updated 2.0 years ago by ▴ 520 • written 2.0 years ago by ★ 9.4k
1
vote
1
reply
700
views
eagle2 + minimac4 script for phasing and imputation
eagle2 minimac4
updated 2.2 years ago by ▴ 190 • written 2.2 years ago by ★ 9.4k
1
vote
0
replies
443
views
Advantage of nCounter PanCancer IO 360™ Panel
IO Panel PanCancer 360 nCounter
2.4 years ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
1.5k
views
How to understand Structural Variation in bedpe format?
SV bedpe
updated 2.5 years ago by ▴ 10 • written 3.5 years ago by ★ 9.4k
0
votes
0
replies
641
views
heterozygous SNV AB>0.15, heterozygous indel<0.20 in UKB-WES
UKB
2.5 years ago by Shicheng Guo ★ 9.4k
1
vote
0
replies
560
views
1,135 parent-offspring pairs, 3,855 full-sibling pairs in UKB
UK UKB biobank
2.5 years ago by Shicheng Guo ★ 9.4k
1
vote
0
replies
571
views
comprehensive discussion to Phenotypic and Genotypic Matchmaking tools
phenotype genotype
2.5 years ago by Shicheng Guo ★ 9.4k
1
vote
1
reply
730
views
Best RNA-seq downstream visualization workflow
snakemake RNAseq nextflow
2.5 years ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
435
views
R package to integrate OMIM, Orphanet and Decipher
Decipher OMIM R Orphanet
2.5 years ago by Shicheng Guo ★ 9.4k
2
votes
3
replies
710
views
refseq stopped to update gene summary
refseq
updated 2.5 years ago by 142k • written 2.5 years ago by ★ 9.4k
1
vote
1
reply
691
views
Genetic variation calling (SNPs) from bulk RNA-seq dataset
RNAseq SNP
updated 2.6 years ago by 100k • written 2.6 years ago by ★ 9.4k
0
votes
1
reply
1.7k
views
Consensus genotype of MUTECT1, MUTECT2, Varscan, Muse and Somaticsniper
consensus mutation bcftools
updated 2.6 years ago by • 0 • written 4.9 years ago by ★ 9.4k
1
vote
2
replies
842
views
How to download GTEx figure from USCS genome browser
UCSC GTEx
updated 2.7 years ago by ▴ 650 • written 2.8 years ago by ★ 9.4k
1
vote
1
reply
696
views
Human tissue expression dataset except GTEx
GTEx
updated 2.7 years ago by ▴ 70 • written 2.7 years ago by ★ 9.4k
0
votes
0
replies
404
views
Pan-cancer over-expressed or down-regulated gene list
TCGA expression
2.8 years ago by Shicheng Guo ★ 9.4k
11
votes
6
replies
14k
views
6 follow
How to download dbSNP153 vcf files in hg19/GRCH37 version
dbsnp153 vcf
updated 18 months ago by ▴ 560 • written 4.7 years ago by ★ 9.4k
1
vote
1
reply
1.2k
views
ChEMBL ID to Ensembl ID
ChEMBL Ensembl
updated 2.8 years ago by ★ 1.0k • written 2.8 years ago by ★ 9.4k
0
votes
0
replies
433
views
GPSPROT image/network download with script
GPSPROT
2.9 years ago by Shicheng Guo ★ 9.4k
0
votes
2
replies
768
views
Best method of integrative analysis for GWAS and differential expression data
GWAS
2.9 years ago by Shicheng Guo ★ 9.4k
0
votes
2
replies
819
views
eQTL Catalogue Browser: limitation
Catalogue eQTL
3.0 years ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
538
views
NDEx database data download
ndex database pathway
3.0 years ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
656
views
Conflict result between RNA-seq and Western-Blot
RNAseq protein
updated 3.0 years ago by ★ 2.9k • written 3.1 years ago by ★ 9.4k
0
votes
1
reply
558
views
Given a disease name, which R package can return relevant tissues of pathogenic?
pathogenic tissue-of-disease
3.1 years ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
799
views
Phenotype Enrichment Analysis vs Gene Enrichment Analysis
enrichment gene phenotype
updated 3.1 years ago by 54k • written 3.1 years ago by ★ 9.4k
0
votes
0
replies
453
views
Catalog Database to TF binding site
TFBS
3.1 years ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
864
views
Instrumental Variables and confounder in Mendelian Randomization
Variables Mendelian randomization Instrumental
3.1 years ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
743
views
Best practice to integrate OMIM data into bioinformation analysis pipeline
OMIM pipeline
3.3 years ago by Shicheng Guo ★ 9.4k
272 results • Page 1 of 6
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