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Comment:
Comment: In IGV is this a heterogeneous mutation or false call?
2 hours ago by
Pierre Lindenbaum
161k
0
votes
2
replies
166
views
Comment:
Comment: In IGV is this a heterogeneous mutation or false call?
3 hours ago by
Pierre Lindenbaum
161k
0
votes
1
reply
166
views
Answer:
Answer: In IGV is this a heterogeneous mutation or false call?
4 hours ago by
Pierre Lindenbaum
161k
0
votes
0
replies
118
views
Comment:
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
6 hours ago by
Pierre Lindenbaum
161k
0
votes
1
reply
118
views
Comment:
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
6 hours ago by
Pierre Lindenbaum
161k
0
votes
0
replies
455
views
Answer:
Answer: Filtering Multi-sample VCF file for all except one Genotype
8 hours ago by
Pierre Lindenbaum
161k
0
votes
1
reply
317
views
Comment:
Comment: Different output for read length
1 day ago by
Pierre Lindenbaum
161k
0
votes
2
replies
317
views
Answer:
Answer: Different output for read length
1 day ago by
Pierre Lindenbaum
161k
0
votes
0
replies
217
views
Comment:
Comment: bcftools - reducing to "sites-only"?
1 day ago by
Pierre Lindenbaum
161k
0
votes
0
replies
163
views
Comment:
Comment: How to convert normalized BigWig file to count matrix?
1 day ago by
Pierre Lindenbaum
161k
1
vote
0
replies
2.8k
views
Comment:
Comment: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
1 day ago by
Pierre Lindenbaum
161k
0
votes
0
replies
177
views
Comment:
Comment: Nextflow: how to get the process work dir, within the process
1 day ago by
Pierre Lindenbaum
161k
3
votes
1
reply
2.8k
views
Answer:
Answer: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
1 day ago by
Pierre Lindenbaum
161k
2
votes
1
reply
177
views
Answer:
Answer: Nextflow: how to get the process work dir, within the process
1 day ago by
Pierre Lindenbaum
161k
1
vote
1
reply
217
views
Comment:
Comment: Help with Biopython for Beginner
updated 1 day ago by
Ram
43k • written 1 day ago by
Pierre Lindenbaum
161k
0
votes
1
reply
217
views
Answer:
Answer: bcftools - reducing to "sites-only"?
1 day ago by
Pierre Lindenbaum
161k
0
votes
1
reply
455
views
Comment:
Comment: Filtering Multi-sample VCF file for all except one Genotype
3 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
237
views
Answer:
Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB
4 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
739
views
Answer:
Answer: Create a new bed file with all pairwise combinations between two other bed files
14 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
739
views
Comment:
Comment: Create a new bed file with all pairwise combinations between two other bed files
14 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
739
views
Comment:
Comment: Create a new bed file with all pairwise combinations between two other bed files
14 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
402
views
Comment:
Comment: Why gatk VariantAnnotator required bam and coverage files
15 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
422
views
Comment:
Comment: Figures are disappeared from html report of SnpEff
15 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
402
views
Answer:
Answer: Why gatk VariantAnnotator required bam and coverage files
15 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
505
views
Comment:
Comment: Fetch table from clinvar database according to a list of rsid
15 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
921
views
Comment:
Comment: Adding CB tag to bam file
15 days ago by
Pierre Lindenbaum
161k
3
votes
1
reply
422
views
Answer:
Answer: Figures are disappeared from html report of SnpEff
15 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
505
views
Comment:
Comment: Fetch table from clinvar database according to a list of rsid
15 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
505
views
Answer:
Answer: Fetch table from clinvar database according to a list of rsid
15 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
296
views
Comment:
Comment: Annovar using R package
15 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
269
views
Answer:
Answer: HaplotypeCaller - only SNPs
16 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
237
views
Comment:
Comment: The Biostar Herald for Tuesday, April 23, 2024
16 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
302
views
Answer:
Answer: Difference between samtools "-f 9" and "-f 11"
17 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
471
views
Comment:
Comment: Using vg gamsort with naive sorting algorithm
17 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
192
views
Comment:
Comment: Plot DNA methylation level of DMR on the basis of certain genes
17 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
285
views
Comment:
Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
17 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
285
views
Comment:
Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
17 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
358
views
Comment:
Comment: interpretartion of a vcf file
17 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
418
views
Comment:
Comment: How to slice a gvcf file with tabix?
17 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
418
views
Comment:
Comment: How to slice a gvcf file with tabix?
updated 17 days ago by
GenoMax
142k • written 17 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
418
views
Answer:
Answer: How to slice a gvcf file with tabix?
17 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
268
views
Answer:
Answer: Getting the nucleotide sequence of proteins, having their UniProt IDs
18 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
358
views
Comment:
Comment: interpretartion of a vcf file
updated 18 days ago by
GenoMax
142k • written 18 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
558
views
Comment:
Comment: Filtering sam or bam file with maximum matching region
19 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
558
views
Comment:
Comment: Filtering sam or bam file with maximum matching region
19 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
311
views
Comment:
Comment: bam merging for archaic samples
20 days ago by
Pierre Lindenbaum
161k
3
votes
1
reply
558
views
Answer:
Answer: Filtering sam or bam file with maximum matching region
20 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
729
views
Answer:
Answer: Mapping cDNA sequence of a single gene to a genome not hosted at UCSC server (wi
21 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
542
views
Comment:
Comment: python file for cpc2
22 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
914
views
Comment:
Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa
22 days ago by
Pierre Lindenbaum
161k
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