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Answer: Answer: Different output for read length
4 hours ago by Pierre Lindenbaum 161k
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1.3k
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Answer: Answer: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
9 hours ago by Pierre Lindenbaum 161k
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123
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Answer: Answer: Nextflow: how to get the process work dir, within the process
10 hours ago by Pierre Lindenbaum 161k
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175
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Answer: Answer: bcftools - reducing to "sites-only"?
21 hours ago by Pierre Lindenbaum 161k
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231
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Answer: Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB
3 days ago by Pierre Lindenbaum 161k
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738
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Answer: Answer: Create a new bed file with all pairwise combinations between two other bed files
13 days ago by Pierre Lindenbaum 161k
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400
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Answer: Answer: Why gatk VariantAnnotator required bam and coverage files
14 days ago by Pierre Lindenbaum 161k
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419
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Answer: Answer: Figures are disappeared from html report of SnpEff
14 days ago by Pierre Lindenbaum 161k
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503
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Answer: Answer: Fetch table from clinvar database according to a list of rsid
14 days ago by Pierre Lindenbaum 161k
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265
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Answer: Answer: HaplotypeCaller - only SNPs
15 days ago by Pierre Lindenbaum 161k
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299
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Answer: Answer: Difference between samtools "-f 9" and "-f 11"
16 days ago by Pierre Lindenbaum 161k
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415
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Answer: Answer: How to slice a gvcf file with tabix?
16 days ago by Pierre Lindenbaum 161k
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264
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Answer: Answer: Getting the nucleotide sequence of proteins, having their UniProt IDs
17 days ago by Pierre Lindenbaum 161k
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556
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Answer: Answer: Filtering sam or bam file with maximum matching region
19 days ago by Pierre Lindenbaum 161k
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726
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Answer: Answer: Mapping cDNA sequence of a single gene to a genome not hosted at UCSC server (wi
20 days ago by Pierre Lindenbaum 161k
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615
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Answer: Answer: Indexing the Reference Genome is not done in STAR
21 days ago by Pierre Lindenbaum 161k
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950
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Answer: Answer: Questions about a bug when transferring cram file to bam file
22 days ago by Pierre Lindenbaum 161k
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480
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Answer: Answer: Sheep reference genome remapping coordinates
22 days ago by Pierre Lindenbaum 161k
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334
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Answer: Answer: Bwa sampe - BGI
23 days ago by Pierre Lindenbaum 161k
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433
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Answer: Answer: Best way to deal with overlapping read names in merged BAM files
24 days ago by Pierre Lindenbaum 161k
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272
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Answer: Answer: CombineGVCFs vs. MergeVcfs
24 days ago by Pierre Lindenbaum 161k
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251
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Answer: Answer: Problem with Sniffles pipeline and SV calling help
24 days ago by Pierre Lindenbaum 161k
2
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2
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412
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Answer: Answer: How to download large-scale cDNA sequences from NCBI effectively ?
26 days ago by Pierre Lindenbaum 161k
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609
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Answer: Answer: Can you suggest a protein PDB that has two chainst but only 50 total number of a
27 days ago by Pierre Lindenbaum 161k
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344
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Answer: Answer: Merging vcf files with bcftools ([E::get_intv] Failed to parse TBX_VCF, was wron
28 days ago by Pierre Lindenbaum 161k
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225
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Answer: Answer: Finding variants within a subset of a BAM file
29 days ago by Pierre Lindenbaum 161k
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458
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Answer: Answer: Downsampling long-read BAM files
29 days ago by Pierre Lindenbaum 161k
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469
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Answer: Answer: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
4 weeks ago by Pierre Lindenbaum 161k
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152
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Answer: Answer: BCFTools install vcfmerge.o error
4 weeks ago by Pierre Lindenbaum 161k
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226
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Answer: Answer: small RNA creating .bam from .sam file
4 weeks ago by Pierre Lindenbaum 161k
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272
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Answer: Answer: latest dbSNP (ncbi) which genome assembly
4 weeks ago by Pierre Lindenbaum 161k
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408
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Answer: Answer: How to I use prefetch (SRAtoolkit) on multiple accessions all at one?
4 weeks ago by Pierre Lindenbaum 161k
2
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2
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558
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Answer: Answer: Artificial deletion in bam
5 weeks ago by Pierre Lindenbaum 161k
2
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370
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Answer: Answer: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
5 weeks ago by Pierre Lindenbaum 161k
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279
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Answer: Answer: filtering VCF sites and impose whatever excluded ad missing
5 weeks ago by Pierre Lindenbaum 161k
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587
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Answer: Answer: frequency of each variant per sample
5 weeks ago by Pierre Lindenbaum 161k
2
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375
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Answer: Answer: Problems with Nextflow to run NanoRtax Pipeline
updated 5 weeks ago by 6.4k • written 5 weeks ago by 161k
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286
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Answer: Answer: Multiple iterations of sorted bam output files with picard SortSam
5 weeks ago by Pierre Lindenbaum 161k
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249
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Answer: Answer: Using nextflow for performing quality control and trimming of reads
5 weeks ago by Pierre Lindenbaum 161k
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325
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Answer: Answer: I am unsure why my files are not being accepted in bedtools jaccard, any tips?
5 weeks ago by Pierre Lindenbaum 161k
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303
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Answer: Answer: BioGRID REST - How to retrieve all the protein interactions?
5 weeks ago by Pierre Lindenbaum 161k
4
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0
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1.1k
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Answer: Answer: F*up Night style events for Bioinformatics ? Comment if you're interested!
6 weeks ago by Pierre Lindenbaum 161k
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0
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369
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Answer: Answer: diffbind : killed dba.count(DBsample, bParallel=FALSE)
6 weeks ago by Pierre Lindenbaum 161k
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395
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Answer: Answer: calculate mismatch rate from VCF file
6 weeks ago by Pierre Lindenbaum 161k
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319
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Answer: Answer: Confirm if a genome position falls into a coding exon
6 weeks ago by Pierre Lindenbaum 161k
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420
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Answer: Answer: 0-based coordinates from samtools depth
6 weeks ago by Pierre Lindenbaum 161k
3
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2
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710
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Answer: Answer: Variant calling of GBS data
6 weeks ago by Pierre Lindenbaum 161k
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718
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Answer: Answer: How to filter Illumina Nirvana variant annotation?
6 weeks ago by Pierre Lindenbaum 161k
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405
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Answer: Answer: What is meant by 'genomic order' in gatk's GatherVcfs, and how do I check for it
6 weeks ago by Pierre Lindenbaum 161k
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551
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Answer: Answer: I have a bed file containing genomic locations and A or B compartment annotation
6 weeks ago by Pierre Lindenbaum 161k
4,694 results • Page 1 of 94
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