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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
15 minutes ago by Pierre Lindenbaum 161k
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35
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
16 minutes ago by Pierre Lindenbaum 161k
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303
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Comment: Comment: Different output for read length
19 hours ago by Pierre Lindenbaum 161k
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210
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Comment: Comment: bcftools - reducing to "sites-only"?
1 day ago by Pierre Lindenbaum 161k
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158
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Comment: Comment: How to convert normalized BigWig file to count matrix?
1 day ago by Pierre Lindenbaum 161k
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2.4k
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Comment: Comment: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
1 day ago by Pierre Lindenbaum 161k
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169
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Comment: Comment: Nextflow: how to get the process work dir, within the process
1 day ago by Pierre Lindenbaum 161k
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210
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Comment: Comment: Help with Biopython for Beginner
updated 1 day ago by 43k • written 1 day ago by 161k
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432
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Comment: Comment: Filtering Multi-sample VCF file for all except one Genotype
2 days ago by Pierre Lindenbaum 161k
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739
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Comment: Comment: Create a new bed file with all pairwise combinations between two other bed files
14 days ago by Pierre Lindenbaum 161k
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739
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Comment: Comment: Create a new bed file with all pairwise combinations between two other bed files
14 days ago by Pierre Lindenbaum 161k
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401
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Comment: Comment: Why gatk VariantAnnotator required bam and coverage files
14 days ago by Pierre Lindenbaum 161k
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422
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Comment: Comment: Figures are disappeared from html report of SnpEff
15 days ago by Pierre Lindenbaum 161k
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505
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Comment: Comment: Fetch table from clinvar database according to a list of rsid
15 days ago by Pierre Lindenbaum 161k
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920
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Comment: Comment: Adding CB tag to bam file
15 days ago by Pierre Lindenbaum 161k
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505
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Comment: Comment: Fetch table from clinvar database according to a list of rsid
15 days ago by Pierre Lindenbaum 161k
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1
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296
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Comment: Comment: Annovar using R package
15 days ago by Pierre Lindenbaum 161k
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237
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Comment: Comment: The Biostar Herald for Tuesday, April 23, 2024
16 days ago by Pierre Lindenbaum 161k
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471
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Comment: Comment: Using vg gamsort with naive sorting algorithm
17 days ago by Pierre Lindenbaum 161k
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192
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Comment: Comment: Plot DNA methylation level of DMR on the basis of certain genes
17 days ago by Pierre Lindenbaum 161k
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283
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Comment: Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
17 days ago by Pierre Lindenbaum 161k
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283
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Comment: Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
17 days ago by Pierre Lindenbaum 161k
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1
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357
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Comment: Comment: interpretartion of a vcf file
17 days ago by Pierre Lindenbaum 161k
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1
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417
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Comment: Comment: How to slice a gvcf file with tabix?
17 days ago by Pierre Lindenbaum 161k
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1
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417
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Comment: Comment: How to slice a gvcf file with tabix?
updated 17 days ago by 142k • written 17 days ago by 161k
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357
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Comment: Comment: interpretartion of a vcf file
updated 17 days ago by 142k • written 18 days ago by 161k
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1
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558
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Comment: Comment: Filtering sam or bam file with maximum matching region
19 days ago by Pierre Lindenbaum 161k
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1
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558
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Comment: Comment: Filtering sam or bam file with maximum matching region
19 days ago by Pierre Lindenbaum 161k
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1
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311
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Comment: Comment: bam merging for archaic samples
20 days ago by Pierre Lindenbaum 161k
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542
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Comment: Comment: python file for cpc2
21 days ago by Pierre Lindenbaum 161k
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1
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914
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Comment: Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa
22 days ago by Pierre Lindenbaum 161k
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953
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Comment: Comment: Questions about a bug when transferring cram file to bam file
22 days ago by Pierre Lindenbaum 161k
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953
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Comment: Comment: Questions about a bug when transferring cram file to bam file
23 days ago by Pierre Lindenbaum 161k
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218
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Comment: Comment: Freyja plot error
23 days ago by Pierre Lindenbaum 161k
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347
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Comment: Comment: Merging vcf files with bcftools ([E::get_intv] Failed to parse TBX_VCF, was wron
23 days ago by Pierre Lindenbaum 161k
2
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336
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Comment: Comment: Bioinformatics_where do i start
updated 24 days ago by 142k • written 24 days ago by 161k
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537
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Comment: Comment: Where to find the homopolymer regions bed file for Hg002 genome?
24 days ago by Pierre Lindenbaum 161k
1
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537
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Comment: Comment: Where to find the homopolymer regions bed file for Hg002 genome?
24 days ago by Pierre Lindenbaum 161k
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436
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Comment: Comment: Best way to deal with overlapping read names in merged BAM files
24 days ago by Pierre Lindenbaum 161k
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1.3k
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Comment: Comment: VCF to human friendly form?
25 days ago by Pierre Lindenbaum 161k
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414
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Comment: Comment: How to download large-scale cDNA sequences from NCBI effectively ?
27 days ago by Pierre Lindenbaum 161k
1
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1
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611
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Comment: Comment: Can you suggest a protein PDB that has two chainst but only 50 total number of a
27 days ago by Pierre Lindenbaum 161k
1
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1
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298
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
28 days ago by Pierre Lindenbaum 161k
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1
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315
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Comment: Comment: True variants selection
29 days ago by Pierre Lindenbaum 161k
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185
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Comment: Comment: How to reveal real AF of variant if duplicates can't be removed (such as in ampl
29 days ago by Pierre Lindenbaum 161k
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196
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Comment: Comment: Extract Di-nucleotide/Tri-Nucleotide substitution frequencies from MSA/VCF file
29 days ago by Pierre Lindenbaum 161k
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225
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Comment: Comment: Finding variants within a subset of a BAM file
29 days ago by Pierre Lindenbaum 161k
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1
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253
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Comment: Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
29 days ago by Pierre Lindenbaum 161k
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1
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230
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Comment: Comment: Can't figure out plink --sample-diff
29 days ago by Pierre Lindenbaum 161k
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1
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473
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Comment: Comment: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
4 weeks ago by Pierre Lindenbaum 161k
7,538 results • Page 1 of 151
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