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Comment: Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
27 days ago by Pierre Lindenbaum 161k
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389
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Comment: Comment: interpretartion of a vcf file
27 days ago by Pierre Lindenbaum 161k
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463
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Comment: Comment: How to slice a gvcf file with tabix?
27 days ago by Pierre Lindenbaum 161k
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463
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Comment: Comment: How to slice a gvcf file with tabix?
updated 27 days ago by 142k • written 27 days ago by 161k
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389
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Comment: Comment: interpretartion of a vcf file
updated 28 days ago by 142k • written 28 days ago by 161k
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616
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Comment: Comment: Filtering sam or bam file with maximum matching region
29 days ago by Pierre Lindenbaum 161k
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616
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Comment: Comment: Filtering sam or bam file with maximum matching region
29 days ago by Pierre Lindenbaum 161k
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329
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Comment: Comment: bam merging for archaic samples
4 weeks ago by Pierre Lindenbaum 161k
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568
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Comment: Comment: python file for cpc2
4 weeks ago by Pierre Lindenbaum 161k
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962
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Comment: Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa
4 weeks ago by Pierre Lindenbaum 161k
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1.0k
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Comment: Comment: Questions about a bug when transferring cram file to bam file
4 weeks ago by Pierre Lindenbaum 161k
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1.0k
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Comment: Comment: Questions about a bug when transferring cram file to bam file
4 weeks ago by Pierre Lindenbaum 161k
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232
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Comment: Comment: Freyja plot error
4 weeks ago by Pierre Lindenbaum 161k
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378
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Comment: Comment: Merging vcf files with bcftools ([E::get_intv] Failed to parse TBX_VCF, was wron
4 weeks ago by Pierre Lindenbaum 161k
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380
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Comment: Comment: Bioinformatics_where do i start
updated 4 weeks ago by 142k • written 4 weeks ago by 161k
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586
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Comment: Comment: Where to find the homopolymer regions bed file for Hg002 genome?
4 weeks ago by Pierre Lindenbaum 161k
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586
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Comment: Comment: Where to find the homopolymer regions bed file for Hg002 genome?
4 weeks ago by Pierre Lindenbaum 161k
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468
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Comment: Comment: Best way to deal with overlapping read names in merged BAM files
5 weeks ago by Pierre Lindenbaum 161k
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1.3k
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Comment: Comment: VCF to human friendly form?
5 weeks ago by Pierre Lindenbaum 161k
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439
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Comment: Comment: How to download large-scale cDNA sequences from NCBI effectively ?
5 weeks ago by Pierre Lindenbaum 161k
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652
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Comment: Comment: Can you suggest a protein PDB that has two chainst but only 50 total number of a
5 weeks ago by Pierre Lindenbaum 161k
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311
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
5 weeks ago by Pierre Lindenbaum 161k
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332
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Comment: Comment: True variants selection
5 weeks ago by Pierre Lindenbaum 161k
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196
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Comment: Comment: How to reveal real AF of variant if duplicates can't be removed (such as in ampl
5 weeks ago by Pierre Lindenbaum 161k
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205
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Comment: Comment: Extract Di-nucleotide/Tri-Nucleotide substitution frequencies from MSA/VCF file
5 weeks ago by Pierre Lindenbaum 161k
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292
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Comment: Comment: Finding variants within a subset of a BAM file
5 weeks ago by Pierre Lindenbaum 161k
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282
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Comment: Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
5 weeks ago by Pierre Lindenbaum 161k
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244
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Comment: Comment: Can't figure out plink --sample-diff
5 weeks ago by Pierre Lindenbaum 161k
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493
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Comment: Comment: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
5 weeks ago by Pierre Lindenbaum 161k
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746
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Comment: Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
5 weeks ago by Pierre Lindenbaum 161k
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345
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Comment: Comment: Using GPUs in snakemake
5 weeks ago by Pierre Lindenbaum 161k
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345
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Comment: Comment: Using GPUs in snakemake
5 weeks ago by Pierre Lindenbaum 161k
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337
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Comment: Comment: Ubuntu storage space is decreasing automatically
5 weeks ago by Pierre Lindenbaum 161k
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337
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Comment: Comment: Ubuntu storage space is decreasing automatically
5 weeks ago by Pierre Lindenbaum 161k
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380
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Comment: Comment: What is the samtools flag used in bamPEFragment?
5 weeks ago by Pierre Lindenbaum 161k
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836
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Comment: Comment: bash script
6 weeks ago by Pierre Lindenbaum 161k
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187
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Comment: Comment: How do I run fastq-dump on multiple prefetched files at once?
6 weeks ago by Pierre Lindenbaum 161k
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299
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Comment: Comment: Regions not clear in VCF
6 weeks ago by Pierre Lindenbaum 161k
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299
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Comment: Comment: Regions not clear in VCF
6 weeks ago by Pierre Lindenbaum 161k
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427
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Comment: Comment: How to I use prefetch (SRAtoolkit) on multiple accessions all at one?
6 weeks ago by Pierre Lindenbaum 161k
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389
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Comment: Comment: Help with finding Genomic coordinates and exon they belong to
6 weeks ago by Pierre Lindenbaum 161k
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389
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Comment: Comment: Help with finding Genomic coordinates and exon they belong to
6 weeks ago by Pierre Lindenbaum 161k
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591
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Comment: Comment: Artificial deletion in bam
6 weeks ago by Pierre Lindenbaum 161k
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664
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Comment: Comment: seg fault, core dumped with manta 1.6.0
6 weeks ago by Pierre Lindenbaum 161k
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681
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Comment: Comment: The bioinformatics paper reappears, but the results are significantly different
6 weeks ago by Pierre Lindenbaum 161k
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591
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Comment: Comment: Artificial deletion in bam
6 weeks ago by Pierre Lindenbaum 161k
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273
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Comment: Comment: Trying to write bwa mem -> samtools view -> samtools sort loop
6 weeks ago by Pierre Lindenbaum 161k
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391
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Comment: Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
6 weeks ago by Pierre Lindenbaum 161k
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377
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Comment: Comment: Incongruencies in GT assignment by Freebayes
6 weeks ago by Pierre Lindenbaum 161k
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391
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Comment: Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
6 weeks ago by Pierre Lindenbaum 161k
7,567 results • Page 2 of 152
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