updated 7 days ago by
lieven.sterck
15k
•
written 7 days ago by
pahurkar.arjun
•
0
0
votes
11
replies
609
views
1
vote
5
replies
474
views
updated 7 days ago by
Jesse
▴
880
•
written 7 days ago by
saamhasan55
▴
10
4
votes
4
replies
446
views
2
votes
1
reply
351
views
0
votes
0
replies
296
views
updated 8 days ago by
GenoMax
153k
•
written 8 days ago by
oliverhooker
▴
110
0
votes
0
replies
290
views
updated 8 days ago by
GenoMax
153k
•
written 8 days ago by
oliverhooker
▴
110
0
votes
2
replies
375
views
0
votes
0
replies
299
views
8 days ago by
Zeynep
•
0
0
votes
2
replies
460
views
8 days ago by
cthangav
▴
110
0
votes
0
replies
284
views
9 days ago by
Akshaj
•
0
4
votes
2
replies
428
views
0
votes
1
reply
360
views
0
votes
0
replies
267
views
9 days ago by
nmannda148
•
0
5
votes
3
replies
446
views
3
votes
11
replies
746
views
updated 8 days ago by
Mensur Dlakic
★
29k
•
written 9 days ago by
pahurkar.arjun
•
0
0
votes
0
replies
406
views
0
votes
0
replies
263
views
0
votes
6
replies
513
views
10 days ago by
Abdelrahman
•
0
2
votes
4
replies
471
views
updated 8 days ago by
colindaven
7.7k
•
written 11 days ago by
Matteo Ungaro
▴
130
0
votes
1
reply
322
views
updated 11 days ago by
GenoMax
153k
•
written 11 days ago by
nahid.islam.zahid
•
0
0
votes
0
replies
262
views
0
votes
1
reply
331
views
updated 7 days ago by
Arup Ghosh
3.4k
•
written 12 days ago by
Farha
•
0
1
vote
3
replies
463
views
1
vote
3
replies
435
views
updated 11 days ago by
dsull
★
7.6k
•
written 12 days ago by
Bioinfonext
▴
470
0
votes
0
replies
265
views
12 days ago by
frarodmar17
•
0
0
votes
0
replies
472
views
8
votes
5
replies
6.6k
views
updated 12 days ago by
DareDevil
★
4.4k
•
written 3.7 years ago by
michael.flower.14
▴
210
0
votes
4
replies
504
views
updated 11 days ago by
i.sudbery
22k
•
written 12 days ago by
rayanelkholdi
•
0
0
votes
0
replies
297
views
13 days ago by
Physalia-courses
★
2.6k
1
vote
1
reply
367
views
0
votes
1
reply
336
views
0
votes
4
replies
500
views
9 days ago by
Joel Wallenius
▴
220
2
votes
6
replies
601
views
0
votes
1
reply
355
views
7
votes
7
replies
1.0k
views
6 follow
updated 14 days ago by
SanjidaR_NCBI
▴
60
•
written 10 weeks ago by
SomeOne
▴
240
1
vote
3
replies
427
views
updated 14 days ago by
Jeremy Leipzig
23k
•
written 14 days ago by
Mahdi&Christ
▴
20
0
votes
0
replies
311
views
updated 14 days ago by
GenoMax
153k
•
written 14 days ago by
oliverhooker
▴
110
0
votes
6
replies
726
views
0
votes
0
replies
339
views
14 days ago by
Anton
▴
100
1
vote
3
replies
440
views
updated 12 days ago by
colindaven
7.7k
•
written 14 days ago by
Franci
•
0
1
vote
3
replies
762
views
1
vote
6
replies
3.0k
views
Which threshold to be put in the MAPQ when doing mpileup of BCF tools on a STAR-generated BAM file ?
updated 13 days ago by
Titus
▴
910
•
written 2.7 years ago by
mohsamir2016
▴
30
1
vote
1
reply
606
views
updated 14 days ago by
gianmarcoabbadessa
•
0
•
written 10 months ago by
lag
▴
10
3
votes
4
replies
494
views
0
votes
6
replies
523
views
14 days ago by
martta95
▴
10
1
vote
1
reply
338
views
updated 14 days ago by
GenoMax
153k
•
written 14 days ago by
ward.alafef
•
0
1
vote
2
replies
416
views
14 days ago by
shevch2009
▴
20
0
votes
0
replies
258
views
updated 15 days ago by
GenoMax
153k
•
written 15 days ago by
oliverhooker
▴
110
0
votes
0
replies
258
views
3
votes
0
replies
331
views
Recent Votes
Recent Locations •
All
Syracuse, NY, United States, 4 minutes ago
United Kingdom, 11 minutes ago
San Francisco, 12 minutes ago
United States, 19 minutes ago
United States, 20 minutes ago
United States, 30 minutes ago
United States, 31 minutes ago
Recent Awards •
All
Popular Question to
camillab.
▴
160
Popular Question to
German.M.Demidov
★
3.0k
Popular Question to
Matthias Zepper
5.1k
Popular Question to
Eric Normandeau
11k
Popular Question to
01de
▴
10
Popular Question to
406339165
▴
10
Popular Question to
Luwell
•
0
Recent Replies
Comment: Estimating copy number of heterologous genes from WGS data in Yarrowia lipolytic
by
GenoMax
153k
You will have to identify where the gene got inserted in the genome (assuming it is integrated and not being maintained extra-chromosomally…
Comment: How to estimate polygenic risk score (PRSs) using the scoring files from PGSCata
by
German.M.Demidov
★
3.0k
I am the person who commented that it is an "one liner" and I have to apologize, it is not an one liner. Found this topic googling for the …
Answer: Clumping- cannot mtfrm
by
Onyeubani
▴
90
As of today, 13th August 2025, this issue can be resolved by following the authentication instructions [here][1]
[1]: https://mrcieu…
Comment: Job search for Data Engineer role
by
Matthias Zepper
5.1k
The Swedish Research Infrastructures currently [have several openings][1], e.g. [Systems Developer Linux / Devops at AIDA Data Hub][2].
…
Comment: What is the best practice for scRNAseq analysis of multiple samples?
by
Tundup
▴
10
Replicates overlap properly in both cases after integration.
Comment: nanopore long sequencing DNA data data basecalling using EPI2ME ,NEXTFLOW and si
by
reziyamaimaiti0331
•
0
my version of singularity is 2.4.6-master.g55b3733,is this the problem ? what is the requirement for version ?
Answer: What is the best practice for scRNAseq analysis of multiple samples?
by
Bastien Hervé
6.4k
What I usually do is checking for ambiant RNA, doublets and QC (number of counts, features, mirtochondria level...) for each sample individ…
Comment: DESeq2 - Changing the order of counts / metadata
by
GenoMax
153k
You can do something like
colData <- colData[colnames(countData), ]
to bring those two in the same order.
Comment: DESeq2 - Changing the order of counts / metadata
by
Mensur Dlakic
★
29k
What is unclear about these two lines not being in the same order?
```
SRR1979370,SRR1979371,SRR1979372,SRR1979373,SRR1979374,SRR1979375
…
Comment: Marker genes of hematopoietic stem cells for cluster annotation in single-cell a
by
ATpoint
89k
Read papers, scRNA-seq on HSPCs was done many times before, check how they annotated it. Research does not happen in a vacuum, you need tor…
Comment: Marker genes of hematopoietic stem cells for cluster annotation in single-cell a
by
Ali
•
0
Hi there. I am also doing a project in the following cell types: LT-HSC, ST-HSC, MPP, LMPP, GMP, MEP and CLP. Did you ever figure out a lis…
Answer: Refpass in VCF
by
Pierre Lindenbaum
166k
The standard only declares `'.'` or `PASS`. https://samtools.github.io/hts-specs/VCFv4.2.pdf
> PASS if this position has passed all fil…
Comment: Problem with Dfam-Database and the RepeatClassifier function of repeat modeler
by
GenoMax
153k
In case you don't get an answer consider posting an issue here: https://github.com/Dfam-consortium/RepeatModeler/issues
There should also …
Comment: nanopore long sequencing DNA data data basecalling using EPI2ME ,NEXTFLOW and si
by
dthorbur
★
3.0k
This was not the file I suggested. The `.nextflow.log` file shows the logging for the run. It's usually hidden because of the `.` at the st…
Traffic: 1985 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6