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Answer: Source for `transcript_name` in GTFs
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Manual annotation is done by `HAVANA` group from Ensembl: https://www.ensembl.org/info/genome/genebuild/manual_havana.html It would be fair…
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> Additionally, I’d greatly appreciate your insights on how to handle this issue for KNN, PCA, and Relief?
I again refer you to what I alr…
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Have you tried using the percentile in the distribution of Jaccard indices as the metric of randomness, as I suggested?
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@atpoint dependencies and hardcoding taken care of for the moment. Thanks again!
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Aaah I didn't know about that, could you share any document that mention that cause it'll be helpfull.
Also the thing I've normal samples a…
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You don’t need to manually normalize read depth before variant calling.
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Coming back to this...
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Right! It is ready in ddradseq_pre.bash but in ddradseq_dedup.bash command line variables setup is not working yet. The directory variable…
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Y…
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Hi. @genomax thank you for responding.
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> apt-genotype-axiom
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