31 minutes ago by
Luca Arbore
▴
10
1
vote
3
replies
125
views
0
votes
0
replies
11
views
0
votes
0
replies
14
views
36 minutes ago by
marongiu.luigi
▴
740
0
votes
0
replies
17
views
1 hour ago by
this_is_me_trying
•
0
0
votes
1
reply
32
views
updated 1 hour ago by
Michael
55k
•
written 1 hour ago by
genomics_student
•
0
0
votes
3
replies
635
views
837
votes
170
replies
178k
views
112 follow
updated 5 weeks ago by
Biostar
3.6k
•
written 8.5 years ago by
Istvan Albert
102k
0
votes
3
replies
336
views
0
votes
1
reply
223
views
updated 2 hours ago by
agis.maulana12
•
0
•
written 4 days ago by
Wenhai
•
0
3
votes
4
replies
150
views
10 hours ago by
anthony.santana.703.j
▴
30
0
votes
1
reply
115
views
updated 14 hours ago by
LChart
4.9k
•
written 1 day ago by
ton_of_questions
•
0
2
votes
2
replies
410
views
updated 14 hours ago by
this_is_me_trying
•
0
•
written 3 months ago by
lijiangres
▴
20
6
votes
6
replies
238
views
updated 19 hours ago by
colindaven
7.5k
•
written 1 day ago by
SomeOne
▴
170
0
votes
1
reply
192
views
updated 1 day ago by
shenwei356
8.7k
•
written 1 day ago by
curiousfellow@123
•
0
7
votes
2
replies
390
views
updated 1 day ago by
colindaven
7.5k
•
written 7 days ago by
anna
▴
70
2
votes
1
reply
195
views
updated 1 day ago by
Mensur Dlakic
★
29k
•
written 2 days ago by
Rushikesh
▴
10
7
votes
6
replies
2.1k
views
0
votes
2
replies
488
views
5
votes
9
replies
637
views
0
votes
0
replies
116
views
0
votes
2
replies
167
views
1 day ago by
J.F.Jiang
▴
930
2
votes
2
replies
171
views
2 hours ago by
Mark
▴
50
5
votes
2
replies
355
views
0
votes
4
replies
235
views
updated 1 day ago by
Michael
55k
•
written 1 day ago by
María José
▴
10
0
votes
2
replies
163
views
14
votes
19
replies
8.2k
views
10 follow
2
votes
0
replies
175
views
0
votes
0
replies
137
views
1
vote
1
reply
213
views
9
votes
7
replies
3.0k
views
updated 4 days ago by
Damianos P. Melidis
▴
60
•
written 6.5 years ago by
DanielC
▴
210
0
votes
4
replies
486
views
0
votes
2
replies
293
views
0
votes
0
replies
852
views
updated 4 days ago by
GenoMax
151k
•
written 4 days ago by
salma.sarker
•
0
0
votes
0
replies
250
views
5 days ago by
xinguok794
•
0
5
votes
1
reply
548
views
updated 5 days ago by
LChart
4.9k
•
written 6 days ago by
anita.szabo08
▴
10
1
vote
2
replies
364
views
0
votes
3
replies
367
views
0
votes
1
reply
366
views
0
votes
1
reply
313
views
2
votes
3
replies
375
views
updated 5 days ago by
shelkmike
★
1.6k
•
written 6 days ago by
synthiiihuh
•
0
0
votes
2
replies
352
views
1 day ago by
gil.hornung
▴
100
2
votes
4
replies
428
views
0
votes
2
replies
334
views
0
votes
1
reply
302
views
0
votes
1
reply
485
views
2
votes
4
replies
487
views
updated 4 days ago by
Gordon Smyth
★
8.1k
•
written 6 days ago by
Nasim Gandomdoust
•
0
8
votes
3
replies
445
views
updated 5 days ago by
jared.andrews07
★
18k
•
written 6 days ago by
txema.heredia
▴
240
0
votes
0
replies
239
views
6 days ago by
Physalia-courses
★
2.6k
7
votes
12
replies
804
views
Recent Votes
Recent Locations •
All
France, 1 minute ago
Machhagan, 2 minutes ago
Germany, 2 minutes ago
Oviedo, 2 minutes ago
Germany, 2 minutes ago
Italy, 4 minutes ago
India, 5 minutes ago
Recent Awards •
All
Popular Question to
i.sudbery
21k
Popular Question to
marongiu.luigi
▴
740
Popular Question to
debitboro
▴
270
Popular Question to
sarahmanderni
▴
120
Popular Question to
genomics_student
•
0
Popular Question to
Vanilla
▴
110
Recent Replies
Comment: Use taxdb tp get scientific names in local BLAST output
by
Luca Arbore
▴
10
Thank you for replies. Fast headers of downloaded sequences look like this
grep "^>" diptera_coi_030625.fasta | head -n 5
>AB0…
Answer: Server Requirements for long read data analysis
by
Michael
55k
Like always, it depends on what you want to do and at what scale. The most resource-intensive step determines the minimum requirements of t…
Answer: 9th Berlin Summer School in NGS Data Analysis 2025 (June 30 - July 4, 2025) -- S
by
ecSeq Bioinformatics
▴
20
Good news! Due to the high demand, we have enlarged the room and extended the registration deadline to 20 June!
Answer: Random seed in scanpy
by
ATpoint
88k
Generally, you need fixed seeds if you want to make analysis reproducible that has a random element. I cannot speak for ScanPy and Python, …
Comment: How to fix this this tangle in my bacterial genome assembly
by
Mark
▴
50
I should have mentioned that the assembly was performed with only nanopore reads. I was just wondering if anything could be done through ma…
Answer: How to obtain the nodes in the graph corresponding to the variant in VCF
by
agis.maulana12
•
0
Straightforward way is using `vg deconstruct -a {vg_graph.gbz} > {variants_in_graph.vcf}`. The variants can be refered back to the input vc…
Comment: How to process Iso-Seq files in SRA public fastqs
by
Abieskawa
•
0
No, the files that it generated were all empty. I did use "top" to check if there is any program use large amount of resources, but I did n…
Comment: miRNA Quantifiaction Tool
by
anthony.santana.703.j
▴
30
I undertand, its the whole "Ive only seen as far as i can because ive stood on the shoulder of giants", I just want familiarity with tools …
Comment: miRNA Quantifiaction Tool
by
GenoMax
151k
> You also limit yourself to the constraints of their pipeline, theres also no harm in building my own.
Absolutely. Consider this though. …
Comment: miRNA Quantifiaction Tool
by
anthony.santana.703.j
▴
30
No yes, I was satsified just wondering if the tool is sufficient enough. I even got alignment and everything. I know no tool is perfect whi…
Comment: miRNA Quantifiaction Tool
by
GenoMax
151k
> Im working on developing my own pipeline
Is there a specific reason you want to do that? Even if you are learning the process, there a…
Comment: ERROR::INVALID_TAG_NM:Record A, Read name B, NM tag (nucleotide differences) in
by
curious
▴
890
Thanks for the response
I think I am more wondering if this is a typical thing that people see and am wondering what is wrong with my data…
Answer: WGCNA pickSoftThreshold problem
by
LChart
4.9k
2.5K genes sounds to me like over-filtering; and what was your rationale for removing variable (high CV) genes? My suggestion would be to o…
Comment: plotProfile Errors of DiffBind
by
this_is_me_trying
•
0
Hello, I'm having the same problem. Did you find a solution?
Comment: Cut&Run TF Analysis - Very Low Peak Counts Despite Good Library Quality
by
ATpoint
88k
There is mostly noise and no clear signal. It suggests that, as said before, IP was bad.
Traffic: 3312 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6