0
votes
1
reply
54
views
0
votes
2
replies
140
views
updated 2 hours ago by
ATpoint
88k
•
written 19 hours ago by
anton.avramov
•
0
836
votes
170
replies
175k
views
112 follow
updated 5 days ago by
Biostar
3.5k
•
written 8.4 years ago by
Istvan Albert
102k
0
votes
1
reply
84
views
1
vote
0
replies
72
views
2
votes
3
replies
154
views
updated 18 hours ago by
Pierre Lindenbaum
166k
•
written 21 hours ago by
Mwangana
•
0
1
vote
2
replies
143
views
2
votes
2
replies
145
views
updated 1 day ago by
GenoMax
151k
•
written 1 day ago by
vikasmh111
•
0
0
votes
3
replies
200
views
updated 1 day ago by
Bastien Hervé
6.2k
•
written 1 day ago by
txema.heredia
▴
210
1
vote
1
reply
128
views
0
votes
3
replies
201
views
0
votes
0
replies
99
views
0
votes
1
reply
938
views
2
votes
4
replies
2.9k
views
9
votes
6
replies
7.8k
views
6 follow
updated 1 day ago by
Pallavi
•
0
•
written 12.2 years ago by
michealsmith
▴
800
6
votes
5
replies
1.9k
views
updated 1 day ago by
GenoMax
151k
•
written 6.2 years ago by
pegi3sdocker
▴
10
1
vote
0
replies
147
views
Job:
Looking for a mentor
0
votes
0
replies
142
views
0
votes
0
replies
121
views
updated 2 days ago by
Pierre Lindenbaum
166k
•
written 2 days ago by
Carolyn
•
0
0
votes
0
replies
128
views
1
vote
8
replies
344
views
1 day ago by
JourneyToAbyss
▴
240
4
votes
13
replies
10k
views
7 follow
0
votes
0
replies
127
views
2 days ago by
zsc25001
•
0
0
votes
0
replies
135
views
1
vote
3
replies
264
views
updated 2 days ago by
jared.andrews07
★
18k
•
written 3 days ago by
SpartanII
•
0
1
vote
5
replies
289
views
updated 2 days ago by
Mensur Dlakic
★
29k
•
written 2 days ago by
Jane123
•
0
0
votes
1
reply
196
views
0
votes
3
replies
236
views
2
votes
2
replies
274
views
updated 2 days ago by
yura.grabovska
▴
760
•
written 4 days ago by
Guillermo
▴
10
0
votes
0
replies
137
views
3 days ago by
S
•
0
6
votes
8
replies
12k
views
7 follow
1
vote
1
reply
191
views
0
votes
0
replies
138
views
3 days ago by
Aspire
▴
380
0
votes
0
replies
141
views
0
votes
0
replies
760
views
0
votes
0
replies
135
views
53
votes
11
replies
49k
views
3 days ago by
dariober
15k
0
votes
1
reply
177
views
0
votes
2
replies
216
views
updated 3 days ago by
lieven.sterck
15k
•
written 3 days ago by
Joseph
•
0
1
vote
2
replies
311
views
0
votes
2
replies
221
views
3 days ago by
ATS
•
0
0
votes
0
replies
150
views
0
votes
7
replies
1.2k
views
4
votes
2
replies
1.0k
views
updated 3 days ago by
Andresa Raquel Capodifoglio
•
0
•
written 19 months ago by
Ben
▴
10
0
votes
3
replies
260
views
0
votes
0
replies
161
views
updated 3 days ago by
GenoMax
151k
•
written 3 days ago by
oliverhooker
▴
110
0
votes
0
replies
160
views
updated 3 days ago by
GenoMax
151k
•
written 3 days ago by
oliverhooker
▴
110
2
votes
2
replies
249
views
updated 1 day ago by
cmdcolin
★
4.2k
•
written 4 days ago by
ramiro.barrantes
▴
20
3
votes
0
replies
194
views
5
votes
2
replies
355
views
Recent Votes
Recent Locations •
All
Nantes, France, just now
France, 12 minutes ago
United States, 28 minutes ago
UCLA, 29 minutes ago
United States, 36 minutes ago
Slovakia, 39 minutes ago
Machhagan, 45 minutes ago
Recent Awards •
All
Popular Question to
dalibenam64
•
0
Popular Question to
DareDevil
★
4.4k
Scholar to
Pierre Lindenbaum
166k
Popular Question to
odi
▴
10
Popular Question to
Rafal
▴
10
Popular Question to
nadietz
▴
10
Popular Question to
Colari19
▴
90
Recent Replies
Answer: About FastP Tool
by
GenoMax
151k
> After using the gatk CollectSummaryAlignment command to have an idea about my aligne reads, it shows that the minimum length is about 19 …
Answer: Transcript identification and quantification
by
dsull
★
7.4k
I regularly work on combinatorial barcoding data.
If you’re open to a pseudoalignment approach, kallisto (via `kb-python`) can process P…
Answer: Transcript identification and quantification
by
ATpoint
88k
> Are there any better ways to do what ...
Parse offers a pipeline for that which is automated (and a bit of a pain but do-able). Contact …
Comment: Treatment of nanoparticles after buying before the experiment
by
ATpoint
88k
This is off-topic here, and experimental design in general should be discussed with your PI and peers to eactly gget "more experienced peop…
Comment: Genomic Data Portal (GDC) download a given a link file
by
Zhenyu Zhang
★
1.3k
download using gdc-client?
Comment: Warning in bcftools when subsetting a VCF by variant ID
by
Pierre Lindenbaum
166k
the message comes from the first bcftools.
verify by running gunzip -c instead of bcftools
```
gunzip -c reheader_6_chrfixed_filtered_im…
Comment: Warning in bcftools when subsetting a VCF by variant ID
by
Mwangana
•
0
@Pierre Lindenbaum, this works perfectly well as it prints to the screen correctly but the error returns when I redirect it to a file:
…
Answer: Warning in bcftools when subsetting a VCF by variant ID
by
Pierre Lindenbaum
166k
```
bcftools view reheader_6_chrfixed_filtered_imputed.vcf.gz |\
awk '/^#CHROM/ {printf("##INFO=<ID=END,Number=1,Type=Integer,Descript…
Comment: Differeces between Seurat::RunPCA and scater::runPCA affect downstream analyses
by
Bastien Hervé
6.2k
> Are scater::runPCA's underlying assumptions/method incompatible with SCT transformation?
Potentially. Could you try doing a dummy test w…
Comment: What is the difference between JASPAR IDs MA0668.3 and MA1993.2 for Neurod2?
by
GenoMax
151k
While we wait for answers in this specific case, it may be best to post your question at JASPAR's google group site: https://groups.google.…
Comment: How can I find KO IDs for ORF sequences in a large FASTA file?
by
Mensur Dlakic
★
29k
I don't think anyone can help you when the only feedback you provide is "there are some errors occurring." If I told you that I tried to bu…
Comment: How can I find KO IDs for ORF sequences in a large FASTA file?
by
Nikesh
•
0
Hi t tried to work with this, but there are some errors occurring, Do you have code or any source material to work on this ? @mensur
Comment: Differeces between Seurat::RunPCA and scater::runPCA affect downstream analyses
by
txema.heredia
▴
210
Thanks for your input.
Yes, the cell types are closely related. Both cell types have already been identified in multiple single cell paper…
Comment: How to deal polyploid and aneuploid sugarcane genome R570 for variant calling
by
dthorbur
★
2.9k
Is there any way to estimate ploidy from the supplier, or from the ancestors that established the hybrids?
I would suggest making an educ…
Traffic: 2802 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6