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Recent Replies
Comment: Poor alignment rates using Bowtie
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GenoMax
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The data above is likely referenced in this past thread from OP (if it is not please let us know): https://www.biostars.org/p/9609664/
Si…
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Can someone please provide me with a tool/sourcecode to convert a VCF into GEDMatch uploadable format?
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Yes, that is correct.
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Just a thought. You could make fake illumina reads from HiFi reads.
Comment: Error in importing data from 10x genomics into RStudio
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1769mkc
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to help you and at the same time other can help when you can cite what exactly you had ran the code, the Seurat version R session info etc,…
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Hi Brent, at one time, and to some extent, BBDuk did trimming of sam/bam files. However, it's a very fiddly process because the cigar stri…
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In my experience, [**tiara**](https://github.com/ibe-uw/tiara) works really well in classifying contigs between the 3 major kingdoms, plus …
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This post does not fit the theme of this forum.
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Please learn [how to ask a good question](https://www.biostars.org/p/75548/). We are unable to help you given the information provided.
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Super hard pass. This just enables the further flooding of study sections with low-quality, poorly thought-out drivel with a veneer of poli…
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Can you check with the ` in silico` PCR tool at UCSC to see what that says : https://genome.ucsc.edu/cgi-bin/hgPcr
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Jared, I know you're highly skeptical. So, let's see if I can prove you wrong. Book a demo, and I'll walk you through the tool personally.
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Gio
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Has that been shown to be more precise that both?
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Here's the command line I've used in my script to preprocess my data (DNA paired-end reads). By preprocess I mean adapter removal, trimming…
Comment: About the Tool FASTP
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Understood, I think from now it's good cause I've checked the quality and it seems good than before.
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